PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.F00621.1.p
Common NameEUGRSUZ_F00621, LOC104448155
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 597aa    MW: 64145.3 Da    PI: 6.5134
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.F00621.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30243300260
                       --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                       dDgynWrKYGqK+vkg efprsYY+Ct+++C+vkk  er+  d++++ei+Y+g+H+h+k
  Eucgr.F00621.1.p 243 DDGYNWRKYGQKHVKGCEFPRSYYKCTYPNCEVKKLFERAP-DGHITEIIYKGTHDHPK 300
                       8****************************************.***************85 PP

2WRKY106.21.7e-33420478159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                       ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk+v++tYeg+Hnh+
  Eucgr.F00621.1.p 420 LDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHD 478
                       59********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182905.75E-24237301IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.5E-26237301IPR003657WRKY domain
PROSITE profilePS5081122.24237301IPR003657WRKY domain
SMARTSM007741.8E-31242300IPR003657WRKY domain
PfamPF031066.2E-23243299IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-37405480IPR003657WRKY domain
SuperFamilySSF1182902.35E-29412480IPR003657WRKY domain
PROSITE profilePS5081138.825415480IPR003657WRKY domain
SMARTSM007743.1E-39420479IPR003657WRKY domain
PfamPF031063.6E-26421478IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009611Biological Processresponse to wounding
GO:0009961Biological Processresponse to 1-aminocyclopropane-1-carboxylic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 597 aa     Download sequence    Send to blast
MGSPPAPDFE PHEFQFRSAA DPSPGGPFSD SDAGPLAGGG GCGGGGGGGA RYKLLSPAKL  60
PISRSACITI PPGLSPTSFL ESPVLLSNVK VEPSPTTGSL IKPHMMNGLI GSNSDTRLAN  120
SGCPDSFDEG RSGIFEFKPL ATSNLVPTEA KHQGSEQAVK VSGQRHSQPF ASLSSVQSDL  180
AVSSKELCLS VPTQAVRSGA SPLAEADPDG LLGRKEQPNN VMQVTQLDNK GNGPSVMTER  240
LSDDGYNWRK YGQKHVKGCE FPRSYYKCTY PNCEVKKLFE RAPDGHITEI IYKGTHDHPK  300
PQPSRRFTGG ATMPIQEERS DRFSFIPAVE STSTVYGETS YNVETDGTPE LSPVAENDET  360
IEGAASLSNR IQNEVDDGDD DDPFLKRRRL DIGGEDVTPV VKPIREPRVV VQTLSEVDIL  420
DDGYRWRKYG QKVVRGNPNP RSYYKCTNAG CPVRKHVERA SHDPKAVITT YEGKHNHDVP  480
TAKSSSHDTA APSALSGLPR TRSEGETVSL DLGVGRSAAS EMASAEKQQI LRPNPVQSRI  540
HYASSALDAV QATPVTAYHG FLNGGINQFG YRENLTEGHS KSTEFLQNMG RILTGP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-36241480877Probable WRKY transcription factor 4
2lex_A2e-36241480877Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1385389KRRRL
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. {ECO:0000250|UniProtKB:Q9SI37}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00455DAPTransfer from AT4G26640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.F00621.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060240.10.0PREDICTED: probable WRKY transcription factor 20
SwissprotQ93WV01e-173WRK20_ARATH; Probable WRKY transcription factor 20
TrEMBLA0A059BL780.0A0A059BL78_EUCGR; Uncharacterized protein
STRINGXP_010060240.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM31332867
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-176WRKY family protein