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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Eucgr.F00378.2.p |
Common Name | EUGRSUZ_F00378, LOC104447992 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family |
HD-ZIP |
Protein Properties |
Length: 278aa MW: 31099.7 Da PI: 5.9465 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.F00378.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 57.4 | 2.5e-18 | 58 | 111 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++++q+++Le+ Fe ++++ e++++LA++l+L+ rqV +WFqNrRa++k
Eucgr.F00378.2.p 58 KKRRLSANQVKALEKNFEIENKLEPERKARLAEELSLQPRQVAIWFQNRRARWK 111
56689************************************************9 PP
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2 | HD-ZIP_I/II | 126.9 | 8.5e-41 | 57 | 149 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
ekkrrls++qvk+LE++Fe e+kLeperK++la+eL lqprqva+WFqnrRAR+ktkqlE+d+ +Lk++yd+lk + ++Le+e+e+L++el+e
Eucgr.F00378.2.p 57 EKKRRLSANQVKALEKNFEIENKLEPERKARLAEELSLQPRQVAIWFQNRRARWKTKQLERDFGHLKASYDSLKLDFDSLEQEKESLAAELTE 149
69**************************************************************************************99986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MKRLSSSDSS DVWISMCSGK EEKVLKKSQG YSIEFQAMLD SLDQEDHSGE EAGLITEKKR 60 RLSANQVKAL EKNFEIENKL EPERKARLAE ELSLQPRQVA IWFQNRRARW KTKQLERDFG 120 HLKASYDSLK LDFDSLEQEK ESLAAELTEL KVKLRRETSE SSNHCAVKHE SPLSESSEDG 180 KPGSCSGSVK EDPNPTPELP PSSAAPPLPL RYGSCSTSPP PPPPPPPPPS SSRGTTAGRG 240 YYHQVRMEEN HPSGFISEES CNFFSVDQPP TLHWYFP*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 82 | 88 | ERKARLA |
2 | 105 | 113 | RRARWKTKQ |