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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Eucgr.F00192.1.p |
| Common Name | EUGRSUZ_F00192, LOC104447873 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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| Family |
ERF |
| Protein Properties |
Length: 167aa MW: 18782.8 Da PI: 9.6743 |
| Description |
ERF family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Eucgr.F00192.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 56.7 | 5.9e-18 | 42 | 91 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+G+r +k +g+WvAeIr+p +kr r++lg++ t+ Aa+a++ a +l+g
Eucgr.F00192.1.p 42 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPIAAARAYDTAVFYLRG 91
69*****99.**********9...336*************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009409 | Biological Process | response to cold |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0001078 | Molecular Function | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MEGEFFTATP TPTATGTTAE KRKQRQQQHH HHHHHHQQGE KPYRGIRMRK WGKWVAEIRE 60
PNKRSRIWLG SYTTPIAAAR AYDTAVFYLR GPSARLNFPE LVFQEDDELR DLSAASIRKK 120
ATEVGARVDA QASAAQPPAP EPNSSRVATE KPDLNEYPKA ENSDGD*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB023482 | 4e-53 | AB023482.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, clone P0680A03. |
| GenBank | AK107775 | 4e-53 | AK107775.1 Oryza sativa Japonica Group cDNA clone:002-133-B12, full insert sequence. |
| GenBank | AP002536 | 4e-53 | AP002536.2 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0015I14. |
| GenBank | AP014962 | 4e-53 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012614 | 4e-53 | CP012614.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 6 sequence. |
