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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.E03273.1.p | ||||||||
Common Name | EUGRSUZ_E03273 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 160aa MW: 17877.5 Da PI: 5.6301 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.9 | 3.1e-07 | 2 | 39 | 17 | 55 |
HHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55 + f+eL +l+P+ + p +K ls + L +A +YI+sLq Eucgr.E03273.1.p 2 KALFSELHSLVPPrS---PTEKtLSLPDQLGEAANYIRSLQ 39 6689*********55...88888*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:4.10.280.10 | 5.4E-6 | 1 | 52 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.75E-7 | 1 | 54 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.299 | 1 | 38 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence Send to blast |
MKALFSELHS LVPPRSPTEK TLSLPDQLGE AANYIRSLQV KVEKMREQKE QLLELGKINT 60 TMNSGPMIGF KSPEIRIWNN KSILEVVLVT GLDGQFMFNE TVRVIHEEGA DIVNASSSYV 120 GDAMLHTIHA KVGEGDSSDE RISERLRKIV NDMLMEFHP* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.E03273.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010057409.1 | 1e-114 | PREDICTED: uncharacterized protein LOC104445270 | ||||
Refseq | XP_010057410.1 | 1e-114 | PREDICTED: uncharacterized protein LOC104445270 | ||||
Swissprot | F4JIJ7 | 3e-34 | BH162_ARATH; Transcription factor bHLH162 | ||||
TrEMBL | A0A059C8K4 | 1e-113 | A0A059C8K4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010057409.1 | 1e-114 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1278 | 25 | 92 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-36 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.E03273.1.p |
Publications ? help Back to Top | |||
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