PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Eucgr.E02744.1.p | ||||||||
Common Name | EUGRSUZ_E02744, LOC104445002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 130aa MW: 14801.9 Da PI: 8.1476 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12 | 0.00065 | 19 | 39 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 y+C++C + +++n ++H r Eucgr.E02744.1.p 19 YRCKKCRRIVASQENIVSHER 39 9******************87 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 130 aa Download sequence Send to blast |
MEAVNSADTG FVPKPQVIYR CKKCRRIVAS QENIVSHERG KGEECFKWRK RTGDLKDWQK 60 DPAECSSIFV EPMKWMQAVE DGFVEEKLQC KGCNARLGSF NWAGMQCNCG AWVNPAFQLH 120 KSRIDECHT* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6n8m_Y | 5e-20 | 20 | 126 | 231 | 343 | Tyrosine-protein phosphatase YVH1 |
6n8n_Y | 5e-20 | 20 | 126 | 231 | 343 | Tyrosine-protein phosphatase YVH1 |
6n8o_Y | 5e-20 | 20 | 126 | 231 | 343 | Tyrosine-protein phosphatase YVH1 |
6rzz_s | 5e-20 | 20 | 126 | 231 | 343 | Tyrosine-protein phosphatase YVH1 |
6s05_s | 5e-20 | 20 | 126 | 231 | 343 | Tyrosine-protein phosphatase YVH1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Eucgr.E02744.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_010057085.1 | 2e-93 | PREDICTED: probable inactive dual specificity protein phosphatase-like At4g18593 | ||||
Swissprot | Q570P7 | 6e-61 | DUSL1_ARATH; Probable inactive dual specificity protein phosphatase-like At4g18593 | ||||
TrEMBL | A0A059C6K1 | 5e-92 | A0A059C6K1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010057080.1 | 9e-93 | (Eucalyptus grandis) |
Link Out ? help Back to Top | |
---|---|
Phytozome | Eucgr.E02744.1.p |
Entrez Gene | 104445002 |