PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00545.1.p
Common NameEUGRSUZ_E00545
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 298aa    MW: 32830.6 Da    PI: 5.1753
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00545.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM286.1e-09549550
               NAM  5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkk 50
                      ++ +Ptde l ++yL++k++g +l+    i+e+diy+ ePw++ ++
  Eucgr.E00545.1.p  5 VKSRPTDEHLFSHYLQRKATGAPLPP-GLIEELDIYSQEPWKIFNA 49
                      5679*******************999.89*************9522 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF023659.6E-85101IPR003441NAC domain
SuperFamilySSF1019418.89E-187107IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MNPLVKSRPT DEHLFSHYLQ RKATGAPLPP GLIEELDIYS QEPWKIFNAA SDRTFYDVER  60
ATRDEIADGR GELVGYKKCF KFQGGRGSSA TSGRWIMYKF SMCDESIVGI GFPCNDVSSL  120
LATIQMRRNQ KTRTCLHNDS GDRTSVICDF AVALPSSTVD GAQPTASQTV SSSVAYAKQL  180
QMPARAAPTL CLDNDKLAFP GFSGDVIADE LAPMATATMQ GSNDEWMEGW MTTELDSVVH  240
SGYNSESRSV APEEEGSYTN LLVRASSPPA TTRYWRTHVS GFWQQHNSQF TSYDRGD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00545.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018720427.11e-104PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A059C2F90.0A0A059C2F9_EUCGR; Uncharacterized protein
STRINGXP_010058227.14e-86(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM13343727
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.11e-12NAC domain containing protein 25