PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.E00139.2.p
Common NameEUGRSUZ_E00139, LOC104443442
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family BES1
Protein Properties Length: 699aa    MW: 77852.5 Da    PI: 5.6258
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.E00139.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822144.59.7e-45742121132
            DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl...eeaeaagssas 87 
                       gg++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   +gskp    ++a +  ss+ 
  Eucgr.E00139.2.p  74 GGARRSRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQGSKPIsgtSAAVTPPSSEM 166
                       6899*****************************************************************988899999975445555567777 PP

            DUF822  88 aspesslq.sslkssalaspvesysaspksssfpspssldsislas 132
                       + ++++l+ ++  ss   spv+  ++++k + +p +s +ds s  +
  Eucgr.E00139.2.p 167 VLQQAPLTsLRGISSGYGSPVDYNASRMKGVYVPNSSPYDSSSRGQ 212
                       8999999888999***************************987653 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056878.4E-3976207IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514452.11E-177257692IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.805.5E-194259694IPR013781Glycoside hydrolase, catalytic domain
PfamPF013736.6E-105265682IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.9E-69296310IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.9E-69317335IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.9E-69339360IPR001554Glycoside hydrolase, family 14
PROSITE patternPS005060343351IPR018238Glycoside hydrolase, family 14, conserved site
PRINTSPR008421.1E-6422431IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007503.9E-69432454IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.9E-69505524IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.9E-69539555IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.9E-69556567IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.9E-69574597IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.1E-6577587IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007503.9E-69613635IPR001554Glycoside hydrolase, family 14
PRINTSPR008421.1E-6664678IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008421.1E-6679693IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 699 aa     Download sequence    Send to blast
MATDMQRLVG TSEDEDEEDI EMDVKEEDDD EDDDMEKHIA TPPLVGVDGL MGSSSNNSRF  60
HHPQIHEQGS NPGGGARRSR PLEEKERTKL RERHRRAITA RILAGLRRHG NYNLRVRADI  120
NDVIAALARE AGWVVLPDGT TFPSRSQGSK PISGTSAAVT PPSSEMVLQQ APLTSLRGIS  180
SGYGSPVDYN ASRMKGVYVP NSSPYDSSSR GQSQISSALG DGGEPLNTQA IIGGSVESVD  240
AKQIVDVPSK LPERDFAATP YIPVYVMLPL GVINVKSELV DPDGLLKQLR ILKSLNVDGV  300
TVDCWWGVVE AHAPQEYNWN GYRRLFQMVH ELKFKLQVIM SFHECGGNVG DDVCIPLPHW  360
VAEIGRSNPD IFFTDREGRR NPECLSWGID KERVLRGRTA VEVYFDYMRS FRAEFNDYFE  420
DGIISMIGIG LGPCGELRYP SNPVKNGWRY PGIGEFQCYD QYLLKNLRKA AEARGQAFWA  480
RGPDNAGSYN SQPQETGFFC DGGDYDGYFG RFFLKWYSQV LIDHGDRVLA LAKLAFDGTC  540
IAAKLSGIYW WYRTASHAAE STAGFYNPSN RDGYATIAAM LKKHGAALNF TCAQLHVLDQ  600
QDFSSALADP DGLAWQVLNA AWDHGIPVIG ENFLPCHTRV GYNKMLDGAK LLNDPDGRHF  660
LSFTYLRLNS ILMERQNLLE FERFVKRMHG EAVRDLQQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1q6d_A1e-14926169111444beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.E00139.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055132.10.0PREDICTED: beta-amylase 7 isoform X3
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A059BZG70.0A0A059BZG7_EUCGR; Beta-amylase
STRINGXP_010055132.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]