PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.D01948.1.p | ||||||||
Common Name | EUGRSUZ_D01948 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 155aa MW: 16968.4 Da PI: 8.3383 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.8 | 0.00011 | 3 | 38 | 18 | 55 |
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + + Lr+ lP + ++K s ++ ++v+YI+++q Eucgr.D01948.1.p 3 TLYGSLRKQLPIEF--LKGKRSISDHIHETVNYIRHMQ 38 56789*******65..9********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 3.93E-5 | 3 | 52 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.5E-4 | 28 | 52 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence Send to blast |
MATLYGSLRK QLPIEFLKGK RSISDHIHET VNYIRHMQNK IQALSDRRDE LKGLSDSGAP 60 KETPECSRTA CSQGDTVMVQ SCMAGVEILI NTASQQGLPL SRAFKALSEE GVNVFSCNST 120 EVSERILHSI KAEVTKGGNG NLFELQQKLM KLTT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.D01948.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010053369.1 | 1e-110 | PREDICTED: transcription factor bHLH120 | ||||
TrEMBL | A0A059CHD1 | 1e-110 | A0A059CHD1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010053369.1 | 1e-109 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2968 | 27 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25410.1 | 1e-35 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.D01948.1.p |