PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.D01811.1.p | ||||||||
Common Name | EUGRSUZ_D01811 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 285aa MW: 31760.1 Da PI: 5.6277 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.9 | 3.2e-31 | 112 | 170 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++prsYYrC+s+ gC ++k vers++dp+v+++tY+geHnh+ Eucgr.D01811.1.p 112 SDMWAWRKYGQKPIKGSPHPRSYYRCSSSkGCLARKLVERSSSDPRVFVVTYTGEHNHT 170 79*************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.8E-31 | 97 | 172 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 33.637 | 106 | 172 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.7E-26 | 109 | 172 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.6E-37 | 111 | 171 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.5E-26 | 113 | 169 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 285 aa Download sequence Send to blast |
MDWMSWQSDA DLRQEEILFG GFSDFAETSA LLDDLEQLYK PFYPEPEAVR DAGLISEEVI 60 EEAENKLKEE EPLTDASTTS QVVHYEETKQ RRRKNQQKRE VHHVTAADGV SSDMWAWRKY 120 GQKPIKGSPH PRSYYRCSSS KGCLARKLVE RSSSDPRVFV VTYTGEHNHT HPTRRNALAG 180 STRNKFASPK AKQPAIAKGN RHAPLANGPC DSPSSTATRS PVTPPPVVTH SEEDKRQLSS 240 NESGLSSGSD ENNTVPTMFF SDEMFMGFEE LNDMVMDPGV AGYS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-18 | 99 | 172 | 2 | 74 | WRKY transcription factor 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.D01811.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010053209.1 | 0.0 | PREDICTED: WRKY transcription factor 22 | ||||
TrEMBL | A0A059CGI4 | 0.0 | A0A059CGI4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010053209.1 | 0.0 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7810 | 27 | 41 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 2e-41 | WRKY DNA-binding protein 27 |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.D01811.1.p |