PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.D01630.1.p | ||||||||
Common Name | EUGRSUZ_D01630 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 165aa MW: 18446.2 Da PI: 8.9136 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.6 | 1.1e-08 | 40 | 83 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + r+RR++i ++ eL +l+P +K++ ae+L+ A +Y+k+Lq Eucgr.D01630.1.p 40 LAARQRRRKITEKTLELGKLVPGG-----RKMNTAEMLQAAYKYVKYLQ 83 567*******************96.....7******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.186 | 33 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 2.75E-12 | 36 | 92 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.84E-8 | 36 | 86 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 1.3E-11 | 37 | 102 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 8.7E-11 | 39 | 88 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.5E-6 | 40 | 83 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 165 aa Download sequence Send to blast |
MLPPQPEPHF QQERCGSCGG RENGTKKPSV GGETLSTQSL AARQRRRKIT EKTLELGKLV 60 PGGRKMNTAE MLQAAYKYVK YLQAQVGILE LNESIQKNEE TRHSKRELQV LLESPKIQEK 120 LYAEEKCLAT KELVQAFAKD PEVQSTDTIG KEIVQLLCAH GWNI* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.D01630.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010053035.1 | 1e-116 | PREDICTED: transcription factor bHLH53 isoform X2 | ||||
Swissprot | Q84RD0 | 2e-30 | BH053_ARATH; Transcription factor bHLH53 | ||||
TrEMBL | A0A059CFM4 | 1e-116 | A0A059CFM4_EUCGR; Uncharacterized protein | ||||
STRING | XP_010053034.1 | 1e-108 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4547 | 25 | 52 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34820.1 | 7e-33 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.D01630.1.p |
Publications ? help Back to Top | |||
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