PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.D01346.1.p | ||||||||
Common Name | EUGRSUZ_D01346 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 102aa MW: 11689.9 Da PI: 10.7667 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.4 | 7.6e-34 | 26 | 79 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++F++aveqLGG+++AtPk +l++m+vkgLt++hvkSHLQ+YR+ Eucgr.D01346.1.p 26 PRLRWTPDLHQCFMHAVEQLGGEDRATPKMVLQIMSVKGLTISHVKSHLQMYRS 79 9****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.705 | 22 | 82 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 6.1E-33 | 22 | 81 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.79E-17 | 23 | 80 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 9.6E-26 | 26 | 80 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.0E-8 | 27 | 78 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MLALLPLGTI SRRPSVVRPY VRSKTPRLRW TPDLHQCFMH AVEQLGGEDR ATPKMVLQIM 60 SVKGLTISHV KSHLQMYRSM KHEQIMQGHL YNSTTFLCIF L* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 5e-22 | 27 | 82 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 5e-22 | 27 | 82 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 4e-22 | 27 | 82 | 3 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 4e-22 | 27 | 82 | 3 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 4e-22 | 27 | 82 | 3 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 4e-22 | 27 | 82 | 3 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 5e-22 | 27 | 82 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 5e-22 | 27 | 82 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 5e-22 | 27 | 82 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 5e-22 | 27 | 82 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 5e-22 | 27 | 82 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 5e-22 | 27 | 82 | 4 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.D01346.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018728305.1 | 2e-57 | PREDICTED: uncharacterized protein LOC108959263 isoform X1 | ||||
Refseq | XP_018728306.1 | 2e-57 | PREDICTED: uncharacterized protein LOC108959263 isoform X2 | ||||
Swissprot | Q700D9 | 2e-28 | MYBF_ARATH; Putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A059CF66 | 4e-69 | A0A059CF66_EUCGR; Uncharacterized protein | ||||
STRING | VIT_00s1624g00010.t01 | 2e-43 | (Vitis vinifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM363 | 28 | 184 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 1e-30 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.D01346.1.p |