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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Eucgr.C00826.1.p |
Common Name | EUGRSUZ_C00826, LOC104436430 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family |
MYB |
Protein Properties |
Length: 326aa MW: 36010.7 Da PI: 6.5114 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.C00826.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 49.8 | 8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT++Ed +l +++k +G g+W+ +++ g+ R++k+c++rw++yl
Eucgr.C00826.1.p 14 RGAWTAQEDRILTNYIKAHGEGRWRNLPKKAGLQRCGKSCRLRWLNYL 61
89********************************************97 PP
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2 | Myb_DNA-binding | 53.1 | 7.3e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++
Eucgr.C00826.1.p 67 RGNISPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111
7899******************.*********.***********986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MGRSPCCSKE GLNRGAWTAQ EDRILTNYIK AHGEGRWRNL PKKAGLQRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGRKVQSNT 120 PTNSQSRSGH VDQLSPNHQR DDDRPRKVKS PRHSETSKMS TDDNSASESP SSKPDARSVK 180 TNAFKCSKVL IDPPPEQELH RNEDPINTDF AASAAVDPAP TGVLPPFTGN IPADLSMDDF 240 EIGDICLSEF LNSDTSSIAN QGQFNSNNSI TISDDLFADD SQVQGLGWAA LSSDSVPDNH 300 QANAGPNFHQ AFASFLDYNG GDQWL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB911341 | 1e-70 | AB911341.1 Vitis vinifera MYBPAR mRNA for R2R3 MYB transcription factor, complete cds. |