 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Eucgr.C00823.1.p |
Common Name | EUGRSUZ_C00823, LOC104436427 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
Family |
GRF |
Protein Properties |
Length: 382aa MW: 43165.9 Da PI: 8.4573 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.C00823.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 79 | 4.4e-25 | 84 | 127 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44
d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e
Eucgr.C00823.1.p 84 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 127
79***************************************997 PP
|
2 | QLQ | 58.1 | 2.6e-20 | 13 | 47 | 2 | 36 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
+FTa+Q+q+L++Q+l+yKyL+++ P+Pp+Ll+ ++
Eucgr.C00823.1.p 13 PFTASQWQELEHQALIYKYLISGIPIPPDLLFSLK 47
8******************************9887 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 382 aa
Download sequence Send
to blast |
MHMMSGGMSS RFPFTASQWQ ELEHQALIYK YLISGIPIPP DLLFSLKRSP SCFDSSHFSP 60 KFLSHQPQHV GWNCFQMGLG KKIDPEPGRC RRTDGKKWRC SKEAYPDSKY CERHMHRGKN 120 RSRKPVEVLS SISSASPTPT PTASITPSNK SPYYSHNPAT NPQSLSSLST SDHSHHNHPN 180 HPHHSYYFSS RPPGNIALSA QDSSTTNFLL DSGSYSQSGQ DYRKNRYLYG LKENHVDEHA 240 FFAEPSGSMR SFSGSSMDDS WQLTPLAMSS SSKQRSCSAL ESDYSYLQLQ SLSDVSKHYK 300 QDVKCELMMP MKMERDEEEP QKTIHRFFDE GPMKSRDNSS WVDVEDNKSS NSSSMSTTKL 360 SISMPSSNDF PAFNSRRNYD G*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP009846 | 1e-45 | AP009846.1 Lotus japonicus genomic DNA, clone: LjT02E24, TM1624a, complete sequence. |