 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Eucgr.C00624.1.p |
Common Name | EUGRSUZ_C00624, LOC104436278 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
Family |
MYB |
Protein Properties |
Length: 295aa MW: 32047.7 Da PI: 7.9286 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Eucgr.C00624.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 47.8 | 3.2e-15 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
rg+W++eEd l+ + + +G+g +W + +++ g++R++k+c++rw++yl
Eucgr.C00624.1.p 14 RGPWSPEEDATLKSYLEAHGTGgNWIALPKKAGLRRCGKSCRLRWLNYL 62
89*********************************************97 PP
|
2 | Myb_DNA-binding | 43.2 | 9.4e-14 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
g +T++Ed ++ ++ ++ G++ W+ Ia+ ++ gRt++++k++w++
Eucgr.C00624.1.p 69 GGFTEDEDNIICNLYNEIGSR-WSVIASQLP-GRTDNDVKNYWNT 111
569******************.*********.***********97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MGRAPCCDKA NVKRGPWSPE EDATLKSYLE AHGTGGNWIA LPKKAGLRRC GKSCRLRWLN 60 YLRPDIKHGG FTEDEDNIIC NLYNEIGSRW SVIASQLPGR TDNDVKNYWN TKLKKKRLAG 120 KVNGANNSSY NTMSTSNAPA LLGFASNHPS GSPNLDMYHR GFSVSGINTF TAAECQVIYD 180 RATTANVPNS AYYPYTGFDH IKSNEIEASS KVSTSSISNS SSISSSSSSL AMDGKPSLLT 240 CDKGTLDEAA AMMDFGFGFP FDAVNNGIWF QERAQDNSLN CGSYISSSDL NYIC*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 9e-31 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |