PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

EIL

Protein Properties

Length: 605aa MW: 67526.6 Da PI: 6.1463

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Eucgr.B03664.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	432.2	5.1e-132	40	379	1	327
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 eel++rmwkd+++lkr+ker+k +++ a++ +ks+++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgk v+gasd++ra Eucgr.B03664.1.p 40 EELERRMWKDRIKLKRIKERQKIA--AQQ-AAERQKSKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKAVSGASDNIRA 129 8************999999963..455.59999****************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT- CS EIN3 94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgl 186 WWkekv+fd+ngpaai+ky+a++l+++ ++s ++ s++++l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPWWPt +e+ww +lgl Eucgr.B03664.1.p 130 WWKEKVKFDKNGPAAITKYEAECLAMGAADSG--RKGSSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTSNEDWWIKLGL 220 ***********************99999..789999************************************************* PP -TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.........XXXXX CS EIN3 187 skdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.........slrkq 270 ++ q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l+vl++ee+++++ s+++ s r++ Eucgr.B03664.1.p 221 PQGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLAVLGREESLIEQPSSDNGtsgitksppSARNG 312 9.9*******************************************************************444467778889999 PP XXXXXXXXXXXXXXX.............XXXXXX.XXXXXXXXXX..................XXXXXXXXXXXXXXXXXXXXX.... CS EIN3 271 spkvtlsceqkedve.............gkkeskikhvqavktta..................gfpvvrkrkkkpsesakvsskevsr 327 +++ +s+++++dv+ ++ + + + k ++++k+ +++ r Eucgr.B03664.1.p 313 KKQPAASSDSDYDVDdadgsggcvsskeTR--------------KnvtvntveighhenntqtN----GQVK---EHREKTRKRKRLR 379 ***************666665554432222..............22333444455554444331....3322...2222222222222 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	8.9E-125	40	287	No hit	No description
Gene3D	G3DSA:1.10.3180.10	7.4E-71	163	295	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamily	SSF116768	8.76E-61	168	290	IPR023278	Ethylene insensitive 3-like protein, DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0042762	Biological Process	regulation of sulfur metabolic process
GO:0071281	Biological Process	cellular response to iron ion
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 605 aa Download sequence Send to blast
MDNLLIAADA MDEGSDIEVD DIRCDNIAEK DVSDEEIDAE ELERRMWKDR IKLKRIKERQ 60 KIAAQQAAER QKSKQTSDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKAV 120 SGASDNIRAW WKEKVKFDKN GPAAITKYEA ECLAMGAADS GRKGSSQSTL QDLQDATLGS 180 LLSSLMQHCD PPQRKYPLEK GTPPPWWPTS NEDWWIKLGL PQGQSPPYKK PHDLKKMWKV 240 GVLTAVIKHM SPDIAKIRRH VRQSKCLQDK MTAKESAIWL AVLGREESLI EQPSSDNGTS 300 GITKSPPSAR NGKKQPAASS DSDYDVDDAD GSGGCVSSKE TRKNVTVNTV EIGHHENNTQ 360 TNGQVKEHRE KTRKRKRLRT KSSSADQPPP PINDHLAYEQ RDSFPDMNHS HIDVQPPGYQ 420 VHGMQQENAA ITDVRPSEND LNLEGQSQLE PLEFNPFSSL PSTDVMSTQN MLVGGKPLLH 480 PLMQNASHAT GAYNYYDTTP SYGPGSSEQQ TRIDTIEPQI RPEDVGTHLP ALYKTGNDIS 540 RVDLPHLGKE AFPTEKDVPF DCNFGSPLAL DFGIQNSPFP SFEDMSSWDN NLEFEDDLIK 600 YFAA*

Sequence ? help Back to Top

Protein Sequence Length: 605 aa Download sequence Send to blast

MDNLLIAADA MDEGSDIEVD DIRCDNIAEK DVSDEEIDAE ELERRMWKDR IKLKRIKERQ  60
KIAAQQAAER QKSKQTSDQA RRKKMSRAQD GILKYMLKLM EVCKARGFVY GIIPEKGKAV  120
SGASDNIRAW WKEKVKFDKN GPAAITKYEA ECLAMGAADS GRKGSSQSTL QDLQDATLGS  180
LLSSLMQHCD PPQRKYPLEK GTPPPWWPTS NEDWWIKLGL PQGQSPPYKK PHDLKKMWKV  240
GVLTAVIKHM SPDIAKIRRH VRQSKCLQDK MTAKESAIWL AVLGREESLI EQPSSDNGTS  300
GITKSPPSAR NGKKQPAASS DSDYDVDDAD GSGGCVSSKE TRKNVTVNTV EIGHHENNTQ  360
TNGQVKEHRE KTRKRKRLRT KSSSADQPPP PINDHLAYEQ RDSFPDMNHS HIDVQPPGYQ  420
VHGMQQENAA ITDVRPSEND LNLEGQSQLE PLEFNPFSSL PSTDVMSTQN MLVGGKPLLH  480
PLMQNASHAT GAYNYYDTTP SYGPGSSEQQ TRIDTIEPQI RPEDVGTHLP ALYKTGNDIS  540
RVDLPHLGKE AFPTEKDVPF DCNFGSPLAL DFGIQNSPFP SFEDMSSWDN NLEFEDDLIK  600
YFAA*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1wij_A	3e-77	167	298	9	140	ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269\|PubMed:9215635, ECO:0000269\|PubMed:9851977}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00233	DAP	Transfer from AT1G73730	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Eucgr.B03664.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010044996.1	0.0	PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
Swissprot	O23116	0.0	EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A059D970	0.0	A0A059D970_EUCGR; Uncharacterized protein
STRING	XP_010044996.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM4658	25	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	1e-175	ETHYLENE-INSENSITIVE3-like 3

Link Out ? help Back to Top
Phytozome	Eucgr.B03664.1.p
Entrez Gene	104433821

Publications ? help Back to Top
Frerigmann H,Gigolashvili T Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. Front Plant Sci, 2014. 5: p. 626 [PMID:25426131] Zheng ZL,Zhang B,Leustek T Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing. Front Plant Sci, 2014. 5: p. 710 [PMID:25566284] Panda SK,Sunkar R Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling. Plant Signal Behav, 2015. 10(4): p. e1010916 [PMID:25912823] Wawrzyńska A,Sirko A EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor. Plant Sci., 2016. 253: p. 50-57 [PMID:27968996]