PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B03392.1.p
Common NameEUGRSUZ_B03392, LOC104433585
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 278aa    MW: 29410.8 Da    PI: 7.5571
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B03392.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.11.8e-09160207455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++++P +    +k    a +L + ++YI+sLq
  Eucgr.B03392.1.p 160 SHSLAERARREKISERMKILQDIVPGC----NKVIGRALVLDEIINYIQSLQ 207
                       8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.01E-9154211No hitNo description
SuperFamilySSF474595.89E-17154226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.939156206IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.9E-17156224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-7160207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-9162212IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDPPAAMING GGSFPGGDPV PYNLADMWLP PAGGGLGLGR HPGARGIAQF LNGSGPNLEA  60
SGGDPAVSAA EARCGGGSRK RRDAEDESAA GSLSTSNGVP NGADGEKRLK TSGCKDRSGD  120
SKAEGQPSSA KPTDESKPQP EPSKQDYIHV RARRGQATDS HSLAERARRE KISERMKILQ  180
DIVPGCNKVI GRALVLDEII NYIQSLQHQV EFLSMKLEAV NSRMNPPIEV FSSKEFGQQP  240
YDTGGMPFGS QAPREYSRGS SPDWLHMQVG GGFDRKI*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B03392.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010044684.10.0PREDICTED: transcription factor bHLH79 isoform X1
SwissprotQ69WS32e-73BH094_ORYSJ; Transcription factor BHLH094
TrEMBLA0A059D8680.0A0A059D868_EUCGR; Uncharacterized protein
STRINGXP_010044684.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18552878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-89BIG PETAL P