PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B03044.1.p
Common NameEUGRSUZ_B03044
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family G2-like
Protein Properties Length: 263aa    MW: 29024 Da    PI: 4.7628
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B03044.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like32.22.4e-10217242126
           G2-like   1 kprlrWtpeLHerFveaveqLGGsek 26 
                       k+r++W++eLH+ F++a++qLGG++ 
  Eucgr.B03044.1.p 217 KQRRCWSTELHRGFLHALQQLGGPDG 242
                       79*********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.4E-7214241IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MEYPERTRSY VEALEEERRK IQVFERELPL CLELVIQAIE RCKQQLSVQG HSSECNSEQT  60
SMDDGRVLEV FIPLKGPYSG DDDEDDACEE EGDGDGDGDG DVHHSSRDDK GGDDNAMEKS  120
DWLRSAQLWN PNPDPIPHRE VQDPPPPPPP SKEVAAVANH LKSHESGAFR PFRIGENNST  180
KKKQPPGRAA SPAPDAAACS TAETASGRTS KQAAQRKQRR CWSTELHRGF LHALQQLGGP  240
DGLCPFLEIS PVCYLPHHLT LD*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B03044.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010044289.11e-177PREDICTED: myb family transcription factor EFM
TrEMBLA0A059D6Z40.0A0A059D6Z4_EUCGR; Uncharacterized protein
STRINGXP_010044289.11e-177(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM34912863
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.12e-38G2-like family protein