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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Eucgr.B02398.1.p | ||||||||
Common Name | EUGRSUZ_B02398, LOC104432765, ZFP2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | C2H2 | ||||||||
Protein Properties | Length: 173aa MW: 18825.9 Da PI: 8.7951 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.7 | 0.00039 | 92 | 114 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F+ L H+r+H Eucgr.B02398.1.p 92 HECSICGLEFPMGQALGGHMRRH 114 78********************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 5.15E-8 | 41 | 114 | No hit | No description |
PROSITE profile | PS50157 | 10.596 | 43 | 70 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 1.5E-10 | 43 | 68 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.54 | 43 | 65 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 45 | 65 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 3.4E-12 | 91 | 116 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 9.162 | 92 | 119 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 0.12 | 92 | 114 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 94 | 114 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MVKRDREDAE VEALAVANCL MLLPRVGECA DSNRESRSTE RMFACKTCNR EFSSFQALGG 60 HRTSHKKQKL IPGGLFHLGC TADSSPAKPK RHECSICGLE FPMGQALGGH MRRHRAAMAE 120 GLAAEAAKPV PVLKRSNSKR VMCLDLNSSL MEDDLTLRLG KVAPPLVLDL LL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Eucgr.B02398.1.p |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat stress. {ECO:0000269|PubMed:18201973}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KC480190 | 0.0 | KC480190.1 Eucalyptus grandis C2H2-type zinc finger protein 2 (ZFP2) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010043589.1 | 1e-123 | PREDICTED: zinc finger protein ZAT8 | ||||
Swissprot | Q9LX85 | 7e-36 | ZAT8_ARATH; Zinc finger protein ZAT8 | ||||
TrEMBL | M9Z0U5 | 1e-121 | M9Z0U5_EUCGR; C2H2-type zinc finger protein 2 | ||||
STRING | XP_010043589.1 | 1e-122 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM531 | 28 | 150 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46080.1 | 5e-37 | C2H2 family protein |
Link Out ? help Back to Top | |
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Phytozome | Eucgr.B02398.1.p |
Entrez Gene | 104432765 |