PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B01486.1.p
Common NameEUGRSUZ_B01486
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 334aa    MW: 36427.6 Da    PI: 5.0001
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B01486.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.21.3e-16233286356
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                       e++r+rr+q+NRe+ArrsR+RK++ + eLe+ v +L+ e + L k+l  +++++
  Eucgr.B01486.1.p 233 EVRRARRMQSNRESARRSRRRKQEHMSELENQVGQLKVEHTGLLKRLTDMNQKY 286
                       789****************************************96666665555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.4E-17231295IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.128233287IPR004827Basic-leucine zipper domain
PfamPF001703.0E-14233286IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-11234286No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-12235285No hitNo description
PROSITE patternPS000360238253IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MNSVFPVDEI GDSYWQPPPP PSSAADPSPG AMGRSQSEWA LESFLAQVTC SGSISPSASS  60
IAPPPTPGRP GEGGVLEDVV EIKKPNGQLA QLNQPQPPPP PQPQPQLQPQ PKVPVNPDDS  120
HAFLKSRLEM ACAAVARFNE GTMKPGEPIG YPKMPLQASI STQSDFQADG SGHGVPIPQG  180
ADSGSLGISA LPTIQRDSGV HVKQTTSESS REDSDDEEFE GDTGTTENKD PAEVRRARRM  240
QSNRESARRS RRRKQEHMSE LENQVGQLKV EHTGLLKRLT DMNQKYDVAS VDNRILKADI  300
ETLRAKVWFL FENNDYMWKT FFGQFMRGGL VDN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247254RRSRRRKQ
2249254SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B01486.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010038789.10.0PREDICTED: light-inducible protein CPRF2 isoform X1
RefseqXP_018723715.10.0PREDICTED: light-inducible protein CPRF2 isoform X4
TrEMBLA0A059D1P70.0A0A059D1P7_EUCGR; Uncharacterized protein
STRINGXP_010038789.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58482645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.12e-32basic leucine zipper 25