PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.B01226.1.p
Common NameEUGRSUZ_B01226
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 207aa    MW: 23341.6 Da    PI: 9.7616
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.B01226.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.41.4e-1473125155
                       CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       ++ +hn+ Er RR+++N  +++Lr+llP a   + kKls  +++ +A +YI ++q
  Eucgr.B01226.1.p  73 KKLNHNASERDRRKKMNGLYSTLRSLLPAA--DRMKKLSVPTTVSRALKYIPEMQ 125
                       6789*************************6..49999**************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.172124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-1573143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-1273125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.10E-1273129No hitNo description
SuperFamilySSF474592.49E-1673142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.5E-1078130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MLSFSASGWP LEDSTSHEQW SHMHRDAYTC YSPPLLRFPF SSPPTPSPPA ELALDPLDIP  60
FGGAKGEEAT MVKKLNHNAS ERDRRKKMNG LYSTLRSLLP AADRMKKLSV PTTVSRALKY  120
IPEMQQQVEK LTQEKEKLLS RINASRDGDY YTSHQEISRG KGSLQILVER STGVECGDLK  180
EKLSALFDHR KRSHVNFLRQ LGNQIM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.B01226.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010036348.11e-111PREDICTED: transcription factor ORG2
TrEMBLA0A059D2E51e-152A0A059D2E5_EUCGR; Uncharacterized protein
STRINGXP_010036348.11e-111(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM48228153
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.15e-34bHLH family protein