PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Eucgr.A01690.1.p
Common NameEUGRSUZ_A01690, LOC104439635
Organism
Eucalyptus grandis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family MYB_related
Protein Properties Length: 778aa    MW: 85870.1 Da    PI: 6.2194
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Eucgr.A01690.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding223.9e-075294347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      +WT +E+e +  a +q G++ +++I  +++  +   q++++++ +
  Eucgr.A01690.1.p 52 AWTRQEEESFFAALRQVGKN-FEKITCRVQ-SKNKDQVRHYYYRL 94
                      6*****************99.*********.***********976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.4E-94599IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.5E-54697IPR009057Homeodomain-like
PROSITE profilePS5129312.0244899IPR017884SANT domain
SMARTSM007171.9E-44997IPR001005SANT/Myb domain
CDDcd001671.11E-45295No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 778 aa     Download sequence    Send to blast
MQSEVQIPLN SETNPHPESH VTQDGGAGLT ASTMDPVLTQ QPAKRPTRQW AAWTRQEEES  60
FFAALRQVGK NFEKITCRVQ SKNKDQVRHY YYRLVRRMNK LLGPGLCLDA KNSKDTNAAM  120
LRWWSLLEKY SCKASKLHLK PRRFKIFVEA LEHQLLKDRK KNVRKRSQGE NCSSPSTISS  180
HGRTSGHDNR AVRLVLVDSQ NIQKLGSGKP PLKRPVNVGV HRSNGKVEST TMKPARQRRK  240
PGGALSSAAY KKWEKAAIAG VSLVADAAEH LERTAVSKEV ENDQCIPKEN GSDHTEEDLP  300
PPPCFSKNQF VESSLQASMK LKLQLFPIDD ATRRSLEKDN HNPFLELTLS NRKKISSVME  360
HLNRKWGSSS VACGELMLCP YGVEREKMVG CQRWTQDTAM SAADVYTVLE NPPVFRLRYG  420
WFSKDELTSI TVQERQAPCL PRESVMACNS TVDSEQIPPS ANHQSEEVGH TYEDQLLSVS  480
ATSGLACPSI VSEERSGYIA AGSKSNLMKP SATGTDTMCY PNETGGGIMR QLNDGDELRS  540
GSNISVSACE WADSLTNISI GDLLEASYDL HANCDDEGVA AKSPQCMPQI SYSCDSFDAA  600
IAAHISRYQN KMGSESILSS HATSIWDAEE TCDAFSFQRN AAVRKEVTSM SATQSEDSVQ  660
TRTGPVGLDG SIEELRRAEK ATYDSDPADP MDECQPQDQH TVENTANDVF GLTDIYWPDS  720
LGPLDLEVPS SKYHAEDLIL GDSLSSLNRL MASSLDAFQN CSFFGMDKKD SGSTVEA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapEucgr.A01690.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010050972.10.0PREDICTED: TSL-kinase interacting protein 1
SwissprotQ8LJT80.0TKI1_ARATH; TSL-kinase interacting protein 1
TrEMBLA0A059DF810.0A0A059DF81_EUCGR; Uncharacterized protein
STRINGXP_010050972.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM96332124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36960.20.0TSL-kinase interacting protein 1