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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Eucgr.A00371.1.p |
| Common Name | EUGRSUZ_A00371 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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| Family |
NAC |
| Protein Properties |
Length: 309aa MW: 34995 Da PI: 5.6124 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Eucgr.A00371.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 131.4 | 6.6e-41 | 12 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrF+ tdeel+ +yLk+k+ g++ + ++i+e+d++++ePw+Lp+ + + ke+ fF++ ++ky +++r+nr+tk+gyWk tg+
Eucgr.A00371.1.p 12 LPPGFRFQATDEELLLDYLKPKILGQPdGRHYDMIPEIDVLEFEPWQLPSlfGHMFSGKELLFFCHLKRKYLNSNRSNRTTKAGYWKPTGEVL 104
79*************************6344478***************5343334789********************************** PP
NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++s +++++g++ktLvfy+gr pkg++t+W+ hey+l
Eucgr.A00371.1.p 105 TIVSGdTQAKIGIRKTLVFYEGRMPKGKRTNWLKHEYHL 143
***9856777****************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MQNTISEVTR SLPPGFRFQA TDEELLLDYL KPKILGQPDG RHYDMIPEID VLEFEPWQLP 60
SLFGHMFSGK ELLFFCHLKR KYLNSNRSNR TTKAGYWKPT GEVLTIVSGD TQAKIGIRKT 120
LVFYEGRMPK GKRTNWLKHE YHLNPKCLGN NHAENEMLPY VVCRIKYKKD KKLMKGRAPT 180
ISPGGYSNSA FTNTNNVSET PMNQEEDHSS YCNNPDNEAA ENREAFDPQP EMSVEELMES 240
LPSSQPLDGN LSYYNTTPAY QPQAAAEEGS SSFFDFSHDN DGNEFGHGYM PSPYSNSAYY 300
SGFDCGNV*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 8e-34 | 1 | 175 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 8e-34 | 1 | 175 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 8e-34 | 1 | 175 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 8e-34 | 1 | 175 | 6 | 171 | NO APICAL MERISTEM PROTEIN |
| 4dul_A | 8e-34 | 1 | 175 | 6 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 8e-34 | 1 | 175 | 6 | 171 | NAC domain-containing protein 19 |
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