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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
EuGene.0600010523 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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Family |
AP2 |
Protein Properties |
Length: 346aa MW: 37341.1 Da PI: 10.5341 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EuGene.0600010523 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 29.1 | 2.5e-09 | 148 | 193 | 1 | 51 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
s y+GV+ +++g++ A+I + rk+ +lg f ++eeAa+a+++a+
EuGene.0600010523 148 SLYRGVSLLRQTGKFHAQINVQ-----RKQLHLGFFFSEEEAARAYDRAAI 193
57******************93.....5*********************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 346 aa
Download sequence Send
to blast |
MGRYTFDSTT QDAKKTLALN APRTVGKVHV PAPGVTAGTE ADGDSGSGKS VEAPLFGGVY 60 GIGNSQDLRQ SVSESEVGTP GRGAEASQWN KTRTRRVSGS SGSKSPSETD CEQSNNAVKN 120 TRQANGLVHK DLVKNLKAQA RRHESRTSLY RGVSLLRQTG KFHAQINVQR KQLHLGFFFS 180 EEEAARAYDR AAIFKASVEG GAICTNMDIS EYKDEIPMLQ SLTQPELLAL LHEMKVKSNE 240 SSAPSSPRKS LKVKTSANTK SFARNDQHNS GVEHVRVKMP CEPPSSPRFD ALSNAAVVAE 300 DRELMGVAKV AVTAVASIPR PRVIDLHVSK RRRTRLLPRQ APAAA*
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