PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS769467.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bHLH | ||||||||
Protein Properties | Length: 224aa MW: 24998.9 Da PI: 5.8197 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20.7 | 7.5e-07 | 26 | 65 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 RR++i +++ L++l+P + +k Ka +L + ++Y++sLq EcS769467.10 26 RREKISERMKYLQDLVPGC----NKIAGKAGMLDEIINYVQSLQ 65 *******************....999*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.877 | 14 | 64 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.1E-5 | 20 | 70 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 3.14E-12 | 22 | 83 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.72E-6 | 26 | 69 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.6E-13 | 27 | 82 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
ALQRKIQEFR RSKSPIISMS ELAEARREKI SERMKYLQDL VPGCNKIAGK AGMLDEIINY 60 VQSLQGQVEF LSMKLAAVTS RVDFNMDPLL AKEMLPNCTA SFPAIDIPTE MINAVYLQYN 120 PAHQVVSCQE SEVIPNANVP RTISAPVPMA EEFFDPSSFA VTPANPFSQL LLRCEISFQA 180 FLILVSYLFL CSHFSPPPLG TLTYKTFSME SQQGRTTNFA GAIF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066167.2 | 1e-88 | PREDICTED: transcription factor bHLH63 | ||||
TrEMBL | A0A059BEA5 | 3e-87 | A0A059BEA5_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066167.1 | 2e-91 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM5947 | 25 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34530.1 | 1e-36 | cryptochrome-interacting basic-helix-loop-helix 1 |