PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS754350.20 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 96aa MW: 11432.4 Da PI: 10.5823 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.3 | 5.3e-18 | 36 | 83 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 lp+GfrFhPtd+elv++yL +k++++++++ +i+e+d+yk++PwdLp EcS754350.20 36 LPAGFRFHPTDDELVNHYLIRKCASQSISV-PIIAEIDLYKFDPWDLPG 83 799***************************.88**************94 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 7.59E-20 | 31 | 85 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 19.722 | 36 | 96 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.4E-8 | 37 | 79 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence Send to blast |
WLRVRELSKF KARKKRARTR ESQKKTNRVE KRPLELPAGF RFHPTDDELV NHYLIRKCAS 60 QSISVPIIAE IDLYKFDPWD LPGTLRPFLC FSRLCC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-22 | 34 | 82 | 13 | 61 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018732519.1 | 2e-52 | PREDICTED: uncharacterized protein LOC104452408 | ||||
Swissprot | Q39013 | 3e-24 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059AK49 | 7e-34 | A0A059AK49_EUCGR; Uncharacterized protein (Fragment) | ||||
STRING | XP_002522919.1 | 3e-25 | (Ricinus communis) | ||||
STRING | XP_010027540.1 | 2e-25 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7967 | 13 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-26 | NAC family protein |