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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS750683.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 27703.3 Da PI: 9.2367 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 29.2 | 2.4e-09 | 123 | 164 | 3 | 51 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 +GV++ k+ +W A I++ +k+++lg+ e+Aa+++++a+ EcS750683.10 123 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVSCQEDAARLYDRAAF 164 79**98..47*********4.....5********************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 3.0E-4 | 122 | 179 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.2E-7 | 123 | 167 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 4.3E-6 | 125 | 169 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence Send to blast |
MVSLRRRKLL GLCSGKASFL APLPKSSDGH ANDTPNQNAK LVTVHPLPLD DVKPPEEVRT 60 TWCLHLLYVI DQKILAKIGS MSSNISGSSS SKEPHNQDFS GQAIKRRKRH RRKHHHNQEP 120 CLMRGVYFKN MKWQAAIKVD KKQIHLGTVS CQEDAARLYD RAAFMCGREP NFELSEEEKQ 180 ELTKLSWDEF LARTRHAITN KKHKRRVGAG SEKKSEPEPE IGDWDGEEAN SLSGSEEVEP 240 DTSVS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010036790.1 | 1e-143 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_010036791.1 | 1e-143 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_010036792.1 | 1e-143 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 | ||||
Refseq | XP_010036793.1 | 1e-143 | PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 | ||||
TrEMBL | A0A059A3Z8 | 1e-142 | A0A059A3Z8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010036790.1 | 1e-143 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6189 | 26 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13040.1 | 8e-48 | ERF family protein |