PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS738285.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 551aa    MW: 60810.1 Da    PI: 5.9688
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS738285.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30278336259
                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   +Dg++WrKYGqK  kg+++pr+YYrCt a gCpv+k+v+r+ ed +++++tYeg+Hnh+
  EcS738285.10 278 SDGCQWRKYGQKIAKGNPCPRAYYRCTVApGCPVRKQVQRCLEDMSILITTYEGTHNHP 336
                   7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-32262338IPR003657WRKY domain
SuperFamilySSF1182901.96E-27270338IPR003657WRKY domain
PROSITE profilePS5081129.344272338IPR003657WRKY domain
SMARTSM007742.2E-37277337IPR003657WRKY domain
PfamPF031066.9E-27279336IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    Send to blast
ERERERERER DYISRETQGR RLVSLSHAFK VMDIDLSLKL DAEEEGERST EDRCEVQVAD  60
HHDDQERVGS PEEAEGVVTT ASGEEQERRE EDDRDGDEEH GSADLSLQDS MKTEELCVLK  120
KEMDRMKEEN KALRRVVEQT MKEYNDLQLK FDDVHQSNQS KDPSTFLSLY TKGKPDHEPK  180
SMSNPKENSP SPSPKNDALR ESDLGLSLGL QIGANPQGIQ VHKEDGIRKD QNHTNFPLIH  240
DKIQRNDQFA GITSHVASMP NRKSRVTVRA RCEAATLSDG CQWRKYGQKI AKGNPCPRAY  300
YRCTVAPGCP VRKQVQRCLE DMSILITTYE GTHNHPLPVG ATAMASTASN AASFVLLDSS  360
MNPLSSNGSM SSNFANAQPS SLPYHIANSS APSQFPRARS FNPSNDPSKG IVLDLTHVNP  420
YELPHNLPMR TTSAVNYPLS HLDTSWMSRR PSYDAFSGNS RGTDKPPGSA ENASASSFAC  480
DPQFRVAVAA ALTSLINNKE KSGAIMSESH RPMEPSSSNR DGESGGSSNG GGNNLVLESF  540
SPNGKPIQLL P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A6e-21264340176WRKY transcription factor 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010065508.10.0PREDICTED: probable WRKY transcription factor 9
TrEMBLA0A059BA950.0A0A059BA95_EUCGR; Uncharacterized protein
STRINGXP_010065508.10.0(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM67362741
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.19e-62WRKY DNA-binding protein 9