PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS725039.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 42aa    MW: 4741.55 Da    PI: 9.37
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS725039.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM348.5e-11938130
           NAM  1 lppGfrFhPtdeelvveyLkkkvegkklel 30
                  lp+GfrFhPtd+elv++yL +k++++ +++
  EcS725039.10  9 LPAGFRFHPTDDELVNDYLIRKCASHAISV 38
                  79*********************9998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-10541IPR003441NAC domain
PROSITE profilePS5100513.295942IPR003441NAC domain
PfamPF023656.7E-71032IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 42 aa     Download sequence    Send to blast
KMKRAQLALP AGFRFHPTDD ELVNDYLIRK CASHAISVPF IA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010027566.11e-21PREDICTED: NAC domain-containing protein 2
TrEMBLA0A059AKA73e-20A0A059AKA7_EUCGR; Uncharacterized protein
STRINGXP_010027566.14e-21(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.19e-15NAC domain containing protein 102