PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS720278.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 76aa    MW: 8655.1 Da    PI: 4.7321
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS720278.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.61.8e-171172262
           NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek..ewyfFs 62
                  p+G+ F+Ptdeelv++yLk kv g + ++  +i+evdi+k+ePw+Lp+ ++++e+   ++fF 
  EcS720278.10 11 PVGYGFRPTDEELVDHYLKLKVLGITGDV-CIIPEVDICKWEPWELPRIFEGKERdaAIHFFL 72
                  79************************999.78***************7555544432779996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-18772IPR003441NAC domain
PROSITE profilePS5100517.41076IPR003441NAC domain
PfamPF023651.3E-71171IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MGAVIIPRNP PVGYGFRPTD EELVDHYLKL KVLGITGDVC IIPEVDICKW EPWELPRIFE  60
GKERDAAIHF FLSVFG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066077.11e-32PREDICTED: protein NTM1-like 9 isoform X1
RefseqXP_018715087.11e-32PREDICTED: protein NTM1-like 9 isoform X2
SwissprotF4JN358e-20NTL9_ARATH; Protein NTM1-like 9
TrEMBLA0A059BBG75e-31A0A059BBG7_EUCGR; Uncharacterized protein
TrEMBLA0A059BCQ95e-31A0A059BCQ9_EUCGR; Uncharacterized protein
TrEMBLA0A059BDD34e-31A0A059BDD3_EUCGR; Uncharacterized protein
STRINGXP_010066077.14e-32(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM79671340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.23e-22NAC transcription factor-like 9
Publications ? help Back to Top
  1. Zheng XY, et al.
    Spatial and temporal regulation of biosynthesis of the plant immune signal salicylic acid.
    Proc. Natl. Acad. Sci. U.S.A., 2015. 112(30): p. 9166-73
    [PMID:26139525]
  2. Guo T, et al.
    Lamin-like Proteins Negatively Regulate Plant Immunity through NAC WITH TRANSMEMBRANE MOTIF1-LIKE9 and NONEXPRESSOR OF PR GENES1 in Arabidopsis thaliana.
    Mol Plant, 2017. 10(10): p. 1334-1348
    [PMID:28943325]