PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcS663236.10
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 214aa    MW: 23762.2 Da    PI: 6.9459
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcS663236.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.74.8e-06729223
                  EETTTTEEESSHHHHHHHHHH.T CS
       zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                  +CpdCg+ F  ++nL+ H+ + H
  EcS663236.10  7 SCPDCGEIFMKPDNLELHLAVrH 29
                  8*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280629IPR007087Zinc finger, C2H2
SuperFamilySSF563997.29E-1631213No hitNo description
Gene3DG3DSA:3.90.228.103.9E-932190IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
LRSTICSCPD CGEIFMKPDN LELHLAVRHA VSELGPEDTS KNIVEIIFQS SWLKKQTPVC  60
KIDRILKVHN TQKTISKFEE YRDSIKAKAT KKNPRCIADG NELLRFHCTM FSCSLGLDGS  120
SNLCNSIPQC NVCNIIRNGF KVGEEGILTT ATSGRAHDNA SLVMKTEDDE TRAMLVCRVI  180
AGRVKKNMEG SMEEYDSAAG ACGLYSNLDE LYVF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010063350.11e-159PREDICTED: uncharacterized protein LOC104450474
TrEMBLA0A059BWS31e-157A0A059BWS3_EUCGR; Uncharacterized protein
STRINGXP_010063350.11e-158(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM19162880
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.15e-81C2H2-like zinc finger protein