PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS581349.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 70aa MW: 8132.26 Da PI: 3.976 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 38.4 | 3.9e-12 | 5 | 53 | 2 | 51 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkv 51 ++GfrF Pt+eel++ yL+ kv g + vi+e+ d y ++PwdLp + EcS581349.10 5 QVGFRFLPTEEELLNGYLTSKVLGYADGC--VIPELdDFYAWDPWDLPGLY 53 68***********************9777..8999989*********9433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.843 | 4 | 70 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.7E-12 | 4 | 59 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.8E-5 | 6 | 47 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 70 aa Download sequence Send to blast |
MERFQVGFRF LPTEEELLNG YLTSKVLGYA DGCVIPELDD FYAWDPWDLP GLYQREFHAP 60 STFPFILVAV |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010026029.1 | 1e-18 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059BCS2 | 2e-34 | A0A059BCS2_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041970.1 | 5e-32 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM16613 | 2 | 12 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 4e-13 | NAC transcription factor-like 9 |