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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
EcS513957.10 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family |
MYB |
Protein Properties |
Length: 139aa MW: 16013.5 Da PI: 10.5692 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
EcS513957.10 | genome | ECGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 61.5 | 1.8e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd++l++ ++++G g+W++ ++ g++R++k+c++rw +yl
EcS513957.10 14 KGPWTPEEDQKLIKHIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61
79********************************************97 PP
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2 | Myb_DNA-binding | 57.4 | 3.2e-18 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++++eE++ +++++ lG++ W++Ia +++ gRt++++k++w+++l
EcS513957.10 67 RGKFSPEEEQTILNLHSILGNK-WSAIAGHLP-GRTDNEIKNFWNTHL 112
89********************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 139 aa
Download sequence Send
to blast |
MGRSPCCDES GLKKGPWTPE EDQKLIKHIQ KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SPEEEQTILN LHSILGNKWS AIAGHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DIFSSLPHL
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250|UniProtKB:Q9M2D9}. |
UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |
UniProt | INDUCTION: Induced by gravity in roots. {ECO:0000269|PubMed:24902892}. |