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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS505229.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 79aa MW: 9388.9 Da PI: 11.4288 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 40.2 | 6.6e-13 | 28 | 56 | 2 | 32 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagC 32 +Dgy+WrKYGqK vk+s++pr Y t++ C EcS505229.10 28 EDGYRWRKYGQKAVKNSPHPR--YATTMPFC 56 8********************..66666666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.1E-14 | 12 | 52 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.31E-10 | 19 | 49 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 13.276 | 22 | 48 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.4E-5 | 27 | 64 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.3E-8 | 28 | 49 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 79 aa Download sequence Send to blast |
NKVRRKGQKR IRQPRFAFMT KSEVDNLEDG YRWRKYGQKA VKNSPHPRYA TTMPFCRLNV 60 SYSQFGLLTF SKNLTAFLL |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010066855.1 | 5e-27 | PREDICTED: probable WRKY transcription factor 57 isoform X1 | ||||
Refseq | XP_010066856.1 | 5e-27 | PREDICTED: probable WRKY transcription factor 57 isoform X1 | ||||
Refseq | XP_010066857.1 | 2e-27 | PREDICTED: probable WRKY transcription factor 57 isoform X2 | ||||
Swissprot | Q9C983 | 7e-23 | WRK57_ARATH; Probable WRKY transcription factor 57 | ||||
TrEMBL | A0A059BFB9 | 1e-25 | A0A059BFB9_EUCGR; Uncharacterized protein | ||||
STRING | XP_010066855.1 | 2e-26 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM4995 | 27 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 3e-25 | WRKY DNA-binding protein 57 |
Publications ? help Back to Top | |||
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