PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC069981.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | Trihelix | ||||||||
Protein Properties | Length: 166aa MW: 18149.2 Da PI: 10.3289 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 91.2 | 1.1e-28 | 50 | 144 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++r e+r+rrg+ +p+W++vs++++++g++r+p+qC+++w+nl+++ykkike+e + ++e++s +++ ++l+ EcC069981.10 50 RWTRQEILVLIQGKRVAETRVRRGRvggsafgsgHVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDYKKIKEWEARTRDETESFWVMRNDLR 144 8**********************9777778888799*******************************************9999999999999986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.6E-5 | 50 | 115 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 6.4 | 50 | 116 | IPR017877 | Myb-like domain |
Pfam | PF13837 | 1.8E-13 | 50 | 140 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0050777 | Biological Process | negative regulation of immune response | ||||
GO:0071219 | Biological Process | cellular response to molecule of bacterial origin | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
MATEQLSLGP AAAGDEAANG VEGRAAGDGL DDGGGGGGGG GGGRAPRLPR WTRQEILVLI 60 QGKRVAETRV RRGRVGGSAF GSGHVEPKWA SVSSYCKRHG VNRGPVQCRK RWSNLAGDYK 120 KIKEWEARTR DETESFWVMR NDLRRERKLP GFFDREVYDI LDHQGS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00288 | DAP | Transfer from AT2G33550 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010044878.1 | 1e-115 | PREDICTED: trihelix transcription factor ASR3 isoform X2 | ||||
Refseq | XP_010044880.1 | 1e-116 | PREDICTED: trihelix transcription factor ASR3 isoform X3 | ||||
Refseq | XP_018724694.1 | 1e-115 | PREDICTED: trihelix transcription factor ASR3 isoform X1 | ||||
Swissprot | Q8VZ20 | 2e-75 | ASR3_ARATH; Trihelix transcription factor ASR3 | ||||
TrEMBL | A0A059D9X7 | 1e-114 | A0A059D9X7_EUCGR; Uncharacterized protein | ||||
STRING | XP_010044878.1 | 1e-115 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6557 | 28 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33550.1 | 7e-72 | Trihelix family protein |
Publications ? help Back to Top | |||
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