PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC065589.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family NAC
Protein Properties Length: 119aa    MW: 13678.4 Da    PI: 11.024
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC065589.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.39.9e-1326070128
           NAM  70 tgkrknratksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                   +g+r+nr t  g+Wkat kd  +   ++ ++g k+ L+f +g + ++g  t   mheyrl
  EcC065589.10   2 NGSRPNRRTPGGFWKATTKDSVIQM-ENMTIGYKRLLAFSRGaSPRRGDGTALSMHEYRL 60 
                   799****************999999.9999**********995667899*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.05E-18192IPR003441NAC domain
PROSITE profilePS5100522.387193IPR003441NAC domain
PfamPF023656.0E-5660IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
PNGSRPNRRT PGGFWKATTK DSVIQMENMT IGYKRLLAFS RGASPRRGDG TALSMHEYRL  60
AEDEKRNRTG TDEKKGAKDK RLDEWVLCKV FTPKHAKHSK NGRKSDHPLK TRNEQNRDQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A5e-1819184163NO APICAL MERISTEM PROTEIN
1ut4_B5e-1819184163NO APICAL MERISTEM PROTEIN
1ut7_A5e-1819184163NO APICAL MERISTEM PROTEIN
1ut7_B5e-1819184163NO APICAL MERISTEM PROTEIN
3swm_A6e-1819187166NAC domain-containing protein 19
3swm_B6e-1819187166NAC domain-containing protein 19
3swm_C6e-1819187166NAC domain-containing protein 19
3swm_D6e-1819187166NAC domain-containing protein 19
3swp_A6e-1819187166NAC domain-containing protein 19
3swp_B6e-1819187166NAC domain-containing protein 19
3swp_C6e-1819187166NAC domain-containing protein 19
3swp_D6e-1819187166NAC domain-containing protein 19
4dul_A5e-1819184163NAC domain-containing protein 19
4dul_B5e-1819184163NAC domain-containing protein 19
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018720398.18e-81PREDICTED: protein ATAF2-like
TrEMBLA0A059D8U76e-80A0A059D8U7_EUCGR; Uncharacterized protein
STRINGXP_010041964.11e-47(Eucalyptus grandis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3471122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.28e-20NAC domain containing protein 47