PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC055170.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 163aa MW: 19552.3 Da PI: 8.0192 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 107.3 | 1.8e-33 | 18 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lp+G+rFhPtdeel++++L++++ g + + +i+e+ ++k++Pw+Lp+ v+++e ew+f s+ k++++++ r+t sg Wk+tg++k EcC055170.30 18 LPVGYRFHPTDEELINHFLRRHILGYRDDP-CIIPETpFVHKFDPWHLPRlfrersIVRSREAEWWFLSRLLFKTQKNSKYDRQTPSGHWKTTGQEK 113 799**********************99777.568888689*********65777765666888********************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +k +++l+g+ + Lvf +++ +++++t Wvmhey l EcC055170.30 114 KINAKsTNRLIGTMRNLVFIENEGSSAKETVWVMHEYCL 152 ***9877788***************************87 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.2E-35 | 16 | 159 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.665 | 18 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.7E-21 | 19 | 152 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0070291 | Biological Process | N-acylethanolamine metabolic process | ||||
GO:0005774 | Cellular Component | vacuolar membrane | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0005794 | Cellular Component | Golgi apparatus | ||||
GO:0005886 | Cellular Component | plasma membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003887 | Molecular Function | DNA-directed DNA polymerase activity | ||||
GO:0047412 | Molecular Function | N-(long-chain-acyl)ethanolamine deacylase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence Send to blast |
MPCLIPVDVF YEHIDCFLPV GYRFHPTDEE LINHFLRRHI LGYRDDPCII PETPFVHKFD 60 PWHLPRLFRE RSIVRSREAE WWFLSRLLFK TQKNSKYDRQ TPSGHWKTTG QEKKINAKST 120 NRLIGTMRNL VFIENEGSSA KETVWVMHEY CLHDNYGANF LDQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-23 | 18 | 152 | 15 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018718048.1 | 1e-119 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A059ASH6 | 1e-118 | A0A059ASH6_EUCGR; Uncharacterized protein | ||||
STRING | XP_010030909.1 | 1e-118 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 8e-30 | NAC domain containing protein 71 |