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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC054909.250 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 224aa MW: 25853.1 Da PI: 9.6736 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 113.9 | 1.6e-35 | 52 | 181 | 3 | 129 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka..eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 pG+rF Ptdeel+ +yLk+kv+g+++++++++++vd++k++P++L +++ a + +ewyfF+ rd+ky++g+r nr t sg+Wk++ k+ +l+ EcC054909.250 52 PGLRFIPTDEELILYYLKPKVAGDPIPASNFFADVDLCKFDPRTLIeNRMGAgiDGDEWYFFTLRDRKYRNGSRWNRCTPSGVWKSSRKESVILA- 146 9***************************999**************745554433777********************************999999. PP NAM 96 kgelvglkktLvfykg.rapkgektdWvmheyrle 129 +++++g k++L+f ++ ++++ td mhey+le EcC054909.250 147 ENRTIGYKTSLAFVRNdSKRRRDGTDLNMHEYKLE 181 999***********7746666778********985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.03E-42 | 49 | 205 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 40.086 | 50 | 207 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.4E-18 | 52 | 180 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001678 | Biological Process | cellular glucose homeostasis | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006413 | Biological Process | translational initiation | ||||
GO:0006468 | Biological Process | protein phosphorylation | ||||
GO:0007165 | Biological Process | signal transduction | ||||
GO:0008033 | Biological Process | tRNA processing | ||||
GO:0015074 | Biological Process | DNA integration | ||||
GO:0046835 | Biological Process | carbohydrate phosphorylation | ||||
GO:0055114 | Biological Process | oxidation-reduction process | ||||
GO:0005622 | Cellular Component | intracellular | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003743 | Molecular Function | translation initiation factor activity | ||||
GO:0003924 | Molecular Function | GTPase activity | ||||
GO:0004396 | Molecular Function | hexokinase activity | ||||
GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | ||||
GO:0004672 | Molecular Function | protein kinase activity | ||||
GO:0005506 | Molecular Function | iron ion binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005524 | Molecular Function | ATP binding | ||||
GO:0005525 | Molecular Function | GTP binding | ||||
GO:0005536 | Molecular Function | glucose binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | ||||
GO:0016783 | Molecular Function | sulfurtransferase activity | ||||
GO:0020037 | Molecular Function | heme binding | ||||
GO:0050662 | Molecular Function | coenzyme binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MENNDQSHNR DRDDQGQRKV GVDPCTPSSS QELAVAAVAP PSKAEFPLEN SPGLRFIPTD 60 EELILYYLKP KVAGDPIPAS NFFADVDLCK FDPRTLIENR MGAGIDGDEW YFFTLRDRKY 120 RNGSRWNRCT PSGVWKSSRK ESVILAENRT IGYKTSLAFV RNDSKRRRDG TDLNMHEYKL 180 EEDKKRDRTS IDGKKLDEWV LCKVYTPRHA KQSKNQRRKK AISH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-32 | 32 | 212 | 3 | 170 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-32 | 32 | 212 | 3 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-32 | 32 | 212 | 3 | 170 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-32 | 32 | 212 | 3 | 170 | NO APICAL MERISTEM PROTEIN |
4dul_A | 3e-32 | 32 | 212 | 3 | 170 | NAC domain-containing protein 19 |
4dul_B | 3e-32 | 32 | 212 | 3 | 170 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010041962.1 | 1e-152 | PREDICTED: NAC domain-containing protein 67-like | ||||
TrEMBL | A0A059D9B1 | 1e-95 | A0A059D9B1_EUCGR; Uncharacterized protein | ||||
STRING | XP_010041962.1 | 1e-151 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04070.2 | 2e-35 | NAC domain containing protein 47 |