PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054709.120
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family WRKY
Protein Properties Length: 396aa    MW: 42327.7 Da    PI: 5.6985
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054709.120genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.5e-31183241259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +D ++WrKYGqK++kgs+fpr+YYrC+s+ gC+++k+vers+ dp++++itY+g+H+h+
  EcC054709.120 183 SDPWAWRKYGQKPIKGSPFPRNYYRCSSSkGCSARKQVERSNADPNIFVITYTGDHTHP 241
                    699************************998****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.7E-31168243IPR003657WRKY domain
SuperFamilySSF1182908.37E-27176243IPR003657WRKY domain
PROSITE profilePS5081132.524177243IPR003657WRKY domain
SMARTSM007749.4E-38182242IPR003657WRKY domain
PfamPF031064.2E-26184241IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0015074Biological ProcessDNA integration
GO:0055114Biological Processoxidation-reduction process
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
GO:0010181Molecular FunctionFMN binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MAEDWDLSAL VRRCSASASA SSAAAAPPEG ENPLACLASL TFEDDDKDPF GFPNLAAPRN  60
GALDELRELY RPFYPDADRS LSRASDFAPA SGSRAPVSPK AAAVPRFDRV SSAPVIGALQ  120
APQQQPQRAA RHQGLDRKVL PAQQPVSSPF PLPAMQAQTP RSRKRKSQQK KSVCHVTAEN  180
LSSDPWAWRK YGQKPIKGSP FPRNYYRCSS SKGCSARKQV ERSNADPNIF VITYTGDHTH  240
PRPTHRNSLA GSTRNKYGTS SSLQKPDSIC PAHSAPAAPC STTSNAASLS PTTPLTAPID  300
EDVAHPCALL TSEDLGMDKD SEDLVGDYED NDDRPEEEEG EDDLLIPNVA AMSEEIFMGF  360
RELGQSPASG DNFSSGPGRA DFTRFSSAAA GAGGGP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-191842441880Disease resistance protein RRS1
5w3x_D2e-191842441880Disease resistance protein RRS1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161166SRKRKS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010060258.10.0PREDICTED: probable WRKY transcription factor 27 isoform X1
TrEMBLA0A059DJM70.0A0A059DJM7_EUCGR; Uncharacterized protein
STRINGXP_010060258.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.19e-53WRKY DNA-binding protein 27