PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC054692.40
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bZIP
Protein Properties Length: 438aa    MW: 48252.9 Da    PI: 8.9613
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC054692.40genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.15.2e-10153194445
                   XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
        bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                    k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  EcC054692.40 153 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 194
                   5889*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.4E-8150213IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415152196IPR004827Basic-leucine zipper domain
CDDcd147085.21E-21154206No hitNo description
SuperFamilySSF579598.75E-7154197No hitNo description
PfamPF001703.8E-7154194IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-7155198No hitNo description
PROSITE patternPS000360157172IPR004827Basic-leucine zipper domain
PfamPF141443.5E-31237311IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006265Biological ProcessDNA topological change
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006537Biological Processglutamate biosynthetic process
GO:0007010Biological Processcytoskeleton organization
GO:0015979Biological Processphotosynthesis
GO:0055114Biological Processoxidation-reduction process
GO:0009522Cellular Componentphotosystem I
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003918Molecular FunctionDNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0004419Molecular Functionhydroxymethylglutaryl-CoA lyase activity
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005524Molecular FunctionATP binding
GO:0008017Molecular Functionmicrotubule binding
GO:0015930Molecular Functionglutamate synthase activity
GO:0016758Molecular Functiontransferase activity, transferring hexosyl groups
GO:0030246Molecular Functioncarbohydrate binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MILRGSEGNS IRSSRITDFG TLEQSLGYRI EDAVDLSRNP VFNQMKSSAQ ALGADVQFGS  60
LNKSLSSSDR NLSVNIVGSQ TLSMHRESQS NLVSIPGAHR ENWGDSTMAD SSPRTDTSTD  120
DTGDKNHRFE GGQLGVAAAS DSSDRSKEKA TDQKTLRRLA QNREAARKSR LRKKAYVQQL  180
ESSRLKLTQL EQELQRARQQ GIFISGSGEQ SHSMSGNGAL AFDVEYARWL EEHNKVVNEL  240
RNAVNAHAGD TELRTIVDNV AAHFDEIFKL KGTAAKADVF HILSGMWKTP AERCFMWIGG  300
FRSSEVLKLL VNQLEPLTEQ QLVGIGNLQQ SSQQAEDALS QGLEALQQSL AETLANSTPA  360
AGPSGNVANY MGQMAMAMGK LGTLEGFLRQ ADNLRQQTLQ QMHRVLTTRQ SARALLAIND  420
YFSRLRALSS LWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010055972.10.0PREDICTED: transcription factor TGA2.3
RefseqXP_010055976.10.0PREDICTED: transcription factor TGA2.3
RefseqXP_010055985.10.0PREDICTED: transcription factor TGA2.3
RefseqXP_010055993.10.0PREDICTED: transcription factor TGA2.3
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A059DHK90.0A0A059DHK9_EUCGR; Uncharacterized protein
STRINGXP_010055972.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-153bZIP family protein