 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EcC054606.10 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
| Family |
DBB |
| Protein Properties |
Length: 268aa MW: 28630.7 Da PI: 4.207 |
| Description |
DBB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EcC054606.10 | genome | ECGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-B_box | 19.4 | 2.2e-06 | 4 | 44 | 5 | 39 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39
+C+ ++e++ +C+++ +lC +C + H+ H++
EcC054606.10 4 ICEFCGEQRSMVYCRSDAACLCLSCDRNVHSAnalsrrHSR 44
7*****************************65677777776 PP
|
| 2 | zf-B_box | 19.7 | 1.8e-06 | 46 | 89 | 4 | 41 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41
C++++++++ C + ++ lC++C +H g H++++
EcC054606.10 46 LLCERCNSQPACVRCAEERVSLCQNCDWIGH-GastsasaHKRQT 89
57***************************9*.5588888888765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MGYICEFCGE QRSMVYCRSD AACLCLSCDR NVHSANALSR RHSRTLLCER CNSQPACVRC 60
AEERVSLCQN CDWIGHGAST SASAHKRQTL NCYSGCPSAA ELSSIWSFVL DYPSGGESAC 120
EKGMGLMSIA EGNENAACIP PKDSSSQDVS VCADDEAGNA NAWVGSSSLP EHKSASLNMG 180
QLAASASTAT PKACLPITRS PGLFEDDRFY EDFNMDEVDL DLENYDELFG VALTNSELLF 240
ENGGIDSLFG AKEMSAADSN CQGPVVAE
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G48250.1 | 6e-89 | B-box type zinc finger protein with CCT domain |
