PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Basic Information? help Back to Top

TF ID

EcC054537.40

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 195aa MW: 22648.7 Da PI: 10.6337

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC054537.40	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.7	7.9e-11	83	134	5	56
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++ rr+ +NRe+ArrsR RK+ +e+L++ v L+ +N++L ++l ++ EcC054537.40 83 RKRRRMVSNRESARRSRMRKQRHLENLRNQVNRLKVQNRELSNRLRLVLYHC 134 5779999***********************************9987766555 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.3E-8	78	128	No hit	No description
SMART	SM00338	5.8E-11	79	143	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.599	81	127	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.0E-8	83	137	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.9E-10	83	133	No hit	No description
CDD	cd14702	2.05E-18	84	134	No hit	No description
PROSITE pattern	PS00036	0	86	101	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0008270	Molecular Function	zinc ion binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 195 aa Download sequence Send to blast
MLAARPTGFP FGPVPYSPFQ SFDNDFAPWD CIDNPFSDKI QSPKPVTSTS MSDDSNLDPV 60 SYPSNSGKSS GEKRKGDAAV DERKRRRMVS NRESARRSRM RKQRHLENLR NQVNRLKVQN 120 RELSNRLRLV LYHCYLLRRS NDQLRSEQSM LRHKLSNMQQ ILLLQQLQQQ QNIPSWPCNS 180 TPIIETCERT SSLIL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	86	KRKGDAAVDERKRRR
2	82	86	RKRRR
3	95	102	RRSRMRKQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010028071.2	1e-139	PREDICTED: light-inducible protein CPRF2-like
TrEMBL	A0A3N7G0T9	4e-60	A0A3N7G0T9_POPTR; Uncharacterized protein
STRING	XP_010028071.1	1e-138	(Eucalyptus grandis)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49760.1	4e-28	basic leucine-zipper 5