PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC054205.80 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | WRKY | ||||||||
Protein Properties | Length: 229aa MW: 25420.1 Da PI: 6.5118 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.8 | 1.5e-30 | 120 | 179 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 dDg++WrKYGqKe+ gs+fpr+YYrCt++ gCp++k+v+rs++dp+v+eitY+g+H++ EcC054205.80 120 DDGFSWRKYGQKEILGSKFPRGYYRCTHKhvqGCPATKQVQRSDDDPTVFEITYRGRHTC 179 8***************************99999*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 7.2E-30 | 106 | 179 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.28E-26 | 114 | 179 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.0E-42 | 119 | 181 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 22.687 | 120 | 177 | IPR003657 | WRKY domain |
Pfam | PF03106 | 9.1E-29 | 120 | 179 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0043531 | Molecular Function | ADP binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence Send to blast |
MEDWEKMNLP NELIQGRELT KQLQRQLHSA VSSSSSSSHE QTQEMLIRGI LTSYDEALSM 60 LNAEPPVGGC PRRLSVSPPS LGGSPMSRGD SDRNLDDGST PRKREAMQRW TERVRAPTPD 120 DGFSWRKYGQ KEILGSKFPR GYYRCTHKHV QGCPATKQVQ RSDDDPTVFE ITYRGRHTCF 180 DHPATVVPSS TLPENQTDSN ASIDDAPLQI GELPVYVSAA TSGNNSQAT |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 1e-21 | 114 | 183 | 9 | 77 | Disease resistance protein RRS1 |
5w3x_D | 1e-21 | 114 | 183 | 9 | 77 | Disease resistance protein RRS1 |
6ir8_A | 8e-22 | 120 | 179 | 9 | 68 | OsWRKY45 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018732490.1 | 1e-152 | PREDICTED: probable WRKY transcription factor 8 | ||||
TrEMBL | A0A059B9V8 | 1e-149 | A0A059B9V8_EUCGR; Uncharacterized protein | ||||
STRING | XP_010068012.1 | 1e-143 | (Eucalyptus grandis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 5e-41 | WRKY family protein |