PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

CAMTA

Protein Properties

Length: 891aa MW: 99492.9 Da PI: 6.8817

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC053945.20	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	168.4	1.1e-52	21	136	2	116
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 ++e + rwlk+ e++ iL+n+e+ +lt+++++rp+sgsl+L+n++++r+fr+DG++w+kkkd +tv E+he+LKvg+ve l+cyYah+e+np+fqrr EcC053945.20 21 YQEaQYRWLKPAEVLYILQNHESCQLTQQPPERPSSGSLFLFNKRVLRFFRRDGHNWRKKKDQRTVGEAHERLKVGNVEKLNCYYAHGEDNPNFQRR 117 566699***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhyle 116 +yw+L+ + ++ivlvhy++ EcC053945.20 118 SYWMLDPACDHIVLVHYRD 136 ***************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51437	77.98	17	143	IPR005559	CG-1 DNA-binding domain
SMART	SM01076	2.9E-75	20	138	IPR005559	CG-1 DNA-binding domain
Pfam	PF03859	1.9E-47	23	136	IPR005559	CG-1 DNA-binding domain
Gene3D	G3DSA:2.60.40.10	1.2E-10	357	445	IPR013783	Immunoglobulin-like fold
SuperFamily	SSF81296	9.52E-20	361	445	IPR014756	Immunoglobulin E-set
CDD	cd00102	2.14E-6	361	445	No hit	No description
Pfam	PF01833	1.8E-10	361	444	IPR002909	IPT domain
Gene3D	G3DSA:1.25.40.20	2.2E-16	558	654	IPR020683	Ankyrin repeat-containing domain
PROSITE profile	PS50297	16.069	559	651	IPR020683	Ankyrin repeat-containing domain
SuperFamily	SSF48403	5.44E-16	562	654	IPR020683	Ankyrin repeat-containing domain
CDD	cd00204	2.11E-13	564	651	No hit	No description
Pfam	PF12796	3.3E-9	571	653	IPR020683	Ankyrin repeat-containing domain
SMART	SM00248	9.3E-4	592	621	IPR002110	Ankyrin repeat
PROSITE profile	PS50088	11.033	592	624	IPR002110	Ankyrin repeat
SMART	SM00248	1300	631	660	IPR002110	Ankyrin repeat
SMART	SM00015	7	709	731	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	7.712	710	739	IPR000048	IQ motif, EF-hand binding site
SuperFamily	SSF52540	2.66E-9	750	813	IPR027417	P-loop containing nucleoside triphosphate hydrolase
SMART	SM00015	0.17	761	783	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	8.224	762	791	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	0.025	764	782	IPR000048	IQ motif, EF-hand binding site
SMART	SM00015	3.8E-4	784	806	IPR000048	IQ motif, EF-hand binding site
PROSITE profile	PS50096	8.993	786	809	IPR000048	IQ motif, EF-hand binding site
Pfam	PF00612	2.7E-5	787	806	IPR000048	IQ motif, EF-hand binding site

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006810	Biological Process	transport
GO:0005634	Cellular Component	nucleus
GO:0005829	Cellular Component	cytosol
GO:0003677	Molecular Function	DNA binding
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 891 aa Download sequence Send to blast
MKVLSILLFS EFSGYNISDL YQEAQYRWLK PAEVLYILQN HESCQLTQQP PERPSSGSLF 60 LFNKRVLRFF RRDGHNWRKK KDQRTVGEAH ERLKVGNVEK LNCYYAHGED NPNFQRRSYW 120 MLDPACDHIV LVHYRDINEG KHSSGSKALF SPGSSAALSP SPSPSPYSNQ NQGSASLDSC 180 QTHSSPSSAE VSSINAIINH GTDNLDGVEG AALCSSSDLD VSKALRRIEE QLSLNDDAIK 240 EIVPVFDDDE YFNSVGLLDY EREISQQDQH EALLQVSDPV NCQFLSENDG VRNVSSNYMP 300 LKDTVASLLE LDNFEVSAYP SFGETHGANP EYYPVSFGQG QPGTSVVGNS CLTVVKTQKY 360 TIREISPEWG YTTEATKIVI VGSFLCDPSE SVWSCMFGDI EVPVEIIQQG VIRCEAPPHS 420 PGKVTLCITS SNRQSCSEVR EFEYRVKSNF CAHCNLEQTK AARHTEELLL LVRFVQMLLC 480 DSAMQKEDGV TLGIHVPRNS KAEDDPWSHI IDGLLVGHEN SSETSNWLLQ ELLKDKLQQW 540 IALRSRQEHD QGGCFLSKKE QGIIHMIAGL GFEWALNSIL GCGVNVNFRD INGWTALHWA 600 ARFGREKMVA ALVASGASAG AVTDPRCQDP AGKTPASIAA SSGHKGLAGY LSEQALTSHL 660 SSLTVKESEL SRGSAELEAE RTINSITNQT LATDEDQLSL KDTLAAVRNA TQAAARIQSA 720 FRAHSFRKRQ QMQVAAAIDD YGSSGDIQGF TGMLKLSSRN TRDSAALSIQ KKFRGWKGRK 780 DFLRFRQKVV KIQAHVRGYQ VRKHYKVLCW AVGILDKVVL RWRRKGVGLR SFQKEAESIE 840 DSDDEDILKV FRKQKVDATV DEAVSRVLGM VDSPNARQQY RRMLERYRQA K

Sequence ? help Back to Top

Protein Sequence Length: 891 aa Download sequence Send to blast

MKVLSILLFS EFSGYNISDL YQEAQYRWLK PAEVLYILQN HESCQLTQQP PERPSSGSLF  60
LFNKRVLRFF RRDGHNWRKK KDQRTVGEAH ERLKVGNVEK LNCYYAHGED NPNFQRRSYW  120
MLDPACDHIV LVHYRDINEG KHSSGSKALF SPGSSAALSP SPSPSPYSNQ NQGSASLDSC  180
QTHSSPSSAE VSSINAIINH GTDNLDGVEG AALCSSSDLD VSKALRRIEE QLSLNDDAIK  240
EIVPVFDDDE YFNSVGLLDY EREISQQDQH EALLQVSDPV NCQFLSENDG VRNVSSNYMP  300
LKDTVASLLE LDNFEVSAYP SFGETHGANP EYYPVSFGQG QPGTSVVGNS CLTVVKTQKY  360
TIREISPEWG YTTEATKIVI VGSFLCDPSE SVWSCMFGDI EVPVEIIQQG VIRCEAPPHS  420
PGKVTLCITS SNRQSCSEVR EFEYRVKSNF CAHCNLEQTK AARHTEELLL LVRFVQMLLC  480
DSAMQKEDGV TLGIHVPRNS KAEDDPWSHI IDGLLVGHEN SSETSNWLLQ ELLKDKLQQW  540
IALRSRQEHD QGGCFLSKKE QGIIHMIAGL GFEWALNSIL GCGVNVNFRD INGWTALHWA  600
ARFGREKMVA ALVASGASAG AVTDPRCQDP AGKTPASIAA SSGHKGLAGY LSEQALTSHL  660
SSLTVKESEL SRGSAELEAE RTINSITNQT LATDEDQLSL KDTLAAVRNA TQAAARIQSA  720
FRAHSFRKRQ QMQVAAAIDD YGSSGDIQGF TGMLKLSSRN TRDSAALSIQ KKFRGWKGRK  780
DFLRFRQKVV KIQAHVRGYQ VRKHYKVLCW AVGILDKVVL RWRRKGVGLR SFQKEAESIE  840
DSDDEDILKV FRKQKVDATV DEAVSRVLGM VDSPNARQQY RRMLERYRQA K

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250\|UniProtKB:Q8GSA7, ECO:0000269\|PubMed:25039701, ECO:0000305\|PubMed:11925432}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269\|PubMed:12218065, ECO:0000269\|PubMed:28351986}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010025296.1	0.0	PREDICTED: calmodulin-binding transcription activator 4
Swissprot	Q9FYG2	0.0	CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBL	A0A059B6X2	0.0	A0A059B6X2_EUCGR; Uncharacterized protein
STRING	XP_010025296.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6476	26	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains

Publications ? help Back to Top
Benn G, et al. A key general stress response motif is regulated non-uniformly by CAMTA transcription factors. Plant J., 2014. 80(1): p. 82-92 [PMID:25039701] Kidokoro S, et al. Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature. Plant Cell, 2017. 29(4): p. 760-774 [PMID:28351986]