 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
EcC053696.40 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 218aa MW: 25280.2 Da PI: 4.8286 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| EcC053696.40 | genome | ECGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 67.9 | 1.3e-21 | 24 | 75 | 5 | 56 |
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
f++eq++ Le++Fe++ +p+ +++ eLA++lgL+ rqV +WFqNrRa++k
EcC053696.40 24 KGFSDEQIRLLETMFESEAKPDPRRKMELARELGLEPRQVAIWFQNRRARWK 75
569************************************************9 PP
|
| 2 | HD-ZIP_I/II | 117 | 1.1e-37 | 23 | 113 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
k+ +s+eq++lLE++Fe+e k +p+rK+elareLgl+prqva+WFqnrRAR+k+kq+E++y++L+++yd+l +e e L++e+++L++el++
EcC053696.40 23 KKGFSDEQIRLLETMFESEAKPDPRRKMELARELGLEPRQVAIWFQNRRARWKSKQVEQEYRVLRASYDKLLAEFECLKTEKQDLENELQK 113
889*************************************************************************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005975 | Biological Process | carbohydrate metabolic process |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006412 | Biological Process | translation |
| GO:0009733 | Biological Process | response to auxin |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005829 | Cellular Component | cytosol |
| GO:0005840 | Cellular Component | ribosome |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0003735 | Molecular Function | structural constituent of ribosome |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 218 aa
Download sequence Send
to blast |
MEKSENCTAG NMKKKKGKSK NMKKGFSDEQ IRLLETMFES EAKPDPRRKM ELARELGLEP 60
RQVAIWFQNR RARWKSKQVE QEYRVLRASY DKLLAEFECL KTEKQDLENE LQKLSGMLDK 120
NHGGGRICRE ASNLEDEDTD CKNEANPFGP HESFDQSLIV ASPDDQLNET EKSSEDVRES 180
RDEENCSVAL PEKWSNFGPS DILDYSCSNA APWWNFWT
|
