PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051308.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 461aa    MW: 49769.5 Da    PI: 6.5085
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051308.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.81.3e-053513881254
                   HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  EcC051308.20 351 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 388
                   677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.973339388IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.69E-6349393No hitNo description
SuperFamilySSF474596.54E-12349406IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.0E-9353396IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0048544Biological Processrecognition of pollen
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MAENFQAGIC GESWWSSLRG MPFAGGASLC LAAANDGGGF GWTAADMAMS NKARSSEHND  60
YSLSDSSMVF ENNHYKAQPR SAVRGCGRSE LVVPDLLGTG FGISLPATPD WNQALLGSGG  120
KFAQSSYGSI LNEEMSSRIQ KDWSPKSYSS CVVEDSSMNG FKQINQEFSS DQSELTSITT  180
SSTTAATCEG FSAEFAVGSG LSGGGLYGFP LIQSLLDEPS DFQPQHQSLL TTAARSVNNF  240
SQTMNSNDQS PPSFAKLSSL LKPSSVNRQP NRLPLSDIAM GPTPMNSLDW TTASPPTIYD  300
KKPSCATPNT KRNCDDAREV NSAVKKSSST EPGFKRPRIE TPSPLPTFKV RKEKLGDRIT  360
ALQQLVSPFG KTDTASVLHE AIEYIKFLHD QVHVLSTPYM RNGASIQHQQ GCDKPKDYAS  420
EGPKQDLKSR GLCLVPISST FPVSHETPVD FWTPTFGGSF R
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010057695.10.0PREDICTED: transcription factor bHLH112
TrEMBLA0A059C8U10.0A0A059C8U1_EUCGR; Uncharacterized protein
STRINGXP_010057695.10.0(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.18e-56bHLH family protein