PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC051200.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family Trihelix
Protein Properties Length: 315aa    MW: 34950.4 Da    PI: 11.206
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC051200.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.41.2e-102121186
      trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..............................rergferspkqCkekwenlnkrykkikeg 67 
                   +Wt++ + +Li a  ++  +l rg+  +++W++v++ +                              ++++ +r+ +qCk++++ l+k++k +k++
  EcC051200.20   2 CWTEDSTFVLIHAWGDRYLALDRGNFSQQDWQDVADSVnsrprfrpprrprrggaadgdppssspsggSSGKARRTGIQCKNRIDTLKKKFKVEKAR 98 
                   8******************************************************************99999********************99987 PP

      trihelix  68 ekkrt....sessstcpyfdqle 86 
                    ++ +     +  s +p+f +l+
  EcC051200.20  99 VSDPRdgpgGGYLSPWPFFADLD 121
                   66543111122345566666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.4E-7142No hitNo description
PfamPF138373.3E-873123No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
DCWTEDSTFV LIHAWGDRYL ALDRGNFSQQ DWQDVADSVN SRPRFRPPRR PRRGGAADGD  60
PPSSSPSGGS SGKARRTGIQ CKNRIDTLKK KFKVEKARVS DPRDGPGGGY LSPWPFFADL  120
DALIGSNFPP TKPSPSPTPP PAAPAPARSR AKRAPAPQPA RSALPAVTVP VRPRSHNRTK  180
RAAARPPAGG SLLRPAFSAA AAADEEESES EPERSSSRRT KSRSGKGGAA RRERGYAELA  240
VAIERLGQIY ERVERKKARE MIELEKQRMQ FAKDLEQQRM RWFLETQIHL QKIKKLKQTP  300
IDGNGLRFPD HIPRD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A059DFV16e-77A0A059DFV1_EUCGR; Uncharacterized protein (Fragment)
STRINGXP_010070415.11e-74(Eucalyptus grandis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-31sequence-specific DNA binding transcription factors