PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC050319.20
Organism
Eucalyptus camaldulensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family C2H2
Protein Properties Length: 260aa    MW: 28165 Da    PI: 6.678
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC050319.20genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.69.4e-05110131223
                   EETTTTEEESSHHHHHHHHHHT CS
       zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                   +C+ C+  F  + +L  H+rtH
  EcC050319.20 110 SCSVCSLKFYGWRELFAHMRTH 131
                   6********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.683109136IPR007087Zinc finger, C2H2
PROSITE patternPS000280111131IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0007264Biological Processsmall GTPase mediated signal transduction
GO:0055114Biological Processoxidation-reduction process
GO:0097222Biological Processmitochondrial mRNA polyadenylation
GO:0005739Cellular Componentmitochondrion
GO:0009507Cellular Componentchloroplast
GO:0003723Molecular FunctionRNA binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005092Molecular FunctionGDP-dissociation inhibitor activity
GO:0005524Molecular FunctionATP binding
GO:0016491Molecular Functionoxidoreductase activity
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016779Molecular Functionnucleotidyltransferase activity
GO:0046872Molecular Functionmetal ion binding
GO:0098519Molecular Functionnucleotide phosphatase activity, acting on free nucleotides
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MSNPHDKLLD LKHGTSPGNG SLRLENSVPN PPDRPPHARR VSDARDDTVV AVSWGGDMMT  60
EVTGWGSSAP RSGRRLWRQC REPDPPAEVA QTAQVPRRKT NHGVPELPRS CSVCSLKFYG  120
WRELFAHMRT HLEKESRCMR ESFPPLDSSV EGEARDRGSG VEGRELASTL LHMSPRANED  180
HGDQNAAFST AGSQGTDVVA AASQGADARG SAAHASPPRR GLGFKFDLNK PPPEEEDDND  240
DHGGSDLKKL PPKAEDGGGR