PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Orthologous Group |

Basic Information? help Back to Top

TF ID

EcC049564.10

Organism

Eucalyptus camaldulensis

Taxonomic ID

34316

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus

Family

bZIP

Protein Properties

Length: 334aa MW: 37549.2 Da PI: 6.8921

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EcC049564.10	genome	ECGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.1	2.5e-10	172	206	5	39
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 k rr+++NReAAr+sR+RKka++++Le+ +L EcC049564.10 172 KTLRRLAQNREAARKSRLRKKAYVQQLETSRMKLN 206 7789************************8554443 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.0E-9	167	217	No hit	No description
SMART	SM00338	2.4E-7	168	235	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.048	170	214	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	5.13E-8	172	215	No hit	No description
CDD	cd14708	2.78E-23	172	224	No hit	No description
Pfam	PF00170	2.4E-8	172	207	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	175	190	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	3.8E-29	264	334	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence Send to blast
MATDKEITNQ LLHHHQQQLQ HQMSFGTMQS TPSSSSSVPQ TFMSKENNGA YDLGELDQAL 60 FLYLDGGQET PNVLHHQQDQ RQNTGMMRPP TLNIFPSQPM HEEPSARVNT GMVSPSTNVP 120 RRQLEHSMEL GDPNNDSSTG PEPAKPIKRE GNRKGSTLGS SELEGPKTPD PKTLRRLAQN 180 REAARKSRLR KKAYVQQLET SRMKLNELEQ EIQRARSQGM FLGGAAVGGD QGLHVGGSNI 240 SSEAAAVFDI EYARWLEEHH RRRCELQAAV QEHLPDSDLR LFVDNCLAHF DEMLNLRAML 300 AKSDVFHLVS GMWMSPAERC FMWIGGFRPS ELIK

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269\|PubMed:12777042}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010038900.1	0.0	PREDICTED: transcription factor TGA2.2
Swissprot	Q52MZ2	1e-142	TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBL	A0A059A1T8	0.0	A0A059A1T8_EUCGR; Uncharacterized protein
STRING	XP_010038900.1	0.0	(Eucalyptus grandis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM7207	28	43

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	1e-112	bZIP family protein