PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC047555.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 28684.8 Da PI: 4.365 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 35.2 | 3.6e-11 | 10 | 89 | 32 | 127 |
NAM 32 evikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 +vi++v+ +++ P++Lp e+ wyf + + n+ ++ g+W g+ +e++ + +g +t fy+gr p+ ektdW m ey EcC047555.10 10 NVITDVNPFNCLPKTLP------ENMWYFTNSVE---------NKGAEGGFWMPRGEPREIFG-DAFIKGWEETHEFYEGRGPQVEKTDWSMLEYY 89 67999999999999999......45677755544.........445689**************.9999**************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 22.171 | 1 | 113 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 2.35E-19 | 7 | 113 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MARADFFPAN VITDVNPFNC LPKTLPENMW YFTNSVENKG AEGGFWMPRG EPREIFGDAF 60 IKGWEETHEF YEGRGPQVEK TDWSMLEYYR TSKVSGEALS AKDAKSLCKV FRSSSSPLSD 120 SKMLQNAAGT EFRRENYLYF LLPDNFNIPT KQCVTNQMQV NTTSRNIMRP ASSFSPSHPI 180 ASLPELDHID SGDYLELLDL DIPQSSSSRS DNSSCMTMSS DEIFDYLVAM LDSEAESGDH 240 VEHRDAGCNL NVSDS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010060913.1 | 1e-158 | PREDICTED: uncharacterized protein LOC104448728 | ||||
TrEMBL | A0A059BP34 | 1e-156 | A0A059BP34_EUCGR; Uncharacterized protein | ||||
STRING | XP_010060914.1 | 1e-165 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM13708 | 10 | 23 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G39610.1 | 9e-13 | NAC domain containing protein 6 |