PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcC046185.90 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | bZIP | ||||||||
Protein Properties | Length: 226aa MW: 25049.1 Da PI: 10.1696 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.9 | 1.2e-09 | 146 | 169 | 4 | 27 |
XCHHHCHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkae 27 ++r +r++kNRe+A rsR+RK+++ EcC046185.90 146 DRRHKRMIKNRESAARSRARKQEK 169 689*******************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.8E-6 | 143 | 217 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.7E-11 | 145 | 204 | No hit | No description |
SuperFamily | SSF57959 | 1.69E-5 | 147 | 204 | No hit | No description |
Pfam | PF00170 | 8.7E-7 | 147 | 170 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.57E-27 | 147 | 211 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 150 | 165 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | ||||
GO:0009911 | Biological Process | positive regulation of flower development | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0008270 | Molecular Function | zinc ion binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence Send to blast |
MEEVWKDITL SSLQPHHHHH HHHHSPSSAG PSLRGNGLQD FLGRPSHKDP PTPANITSPS 60 SLPPHHPLTF LSLNNSGPEF HFLDDSSPLG LSTTRFQSHS RAGMACFSTS PFEALAGSAD 120 PGNPGDVAAF GNIKKRVSES EGGSGDRRHK RMIKNRESAA RSRARKQEKF LFLCVFKAYT 180 NELELQVAHL LEENARLKKQ QEQLWMAAAS QIPKKHSLHR TSTAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor required for the transition to flowering promoted by FT. {ECO:0000269|PubMed:16099979, ECO:0000269|PubMed:16099980}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010033526.1 | 1e-142 | PREDICTED: protein FD | ||||
Swissprot | Q84JK2 | 1e-48 | FD_ARATH; Protein FD | ||||
TrEMBL | A0A059AH96 | 1e-101 | A0A059AH96_EUCGR; Uncharacterized protein | ||||
STRING | XP_010033526.1 | 1e-141 | (Eucalyptus grandis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 1e-42 | bZIP family protein |